Raphanus sativus (radish): 108831661
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Entry
108831661 CDS
T06014
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108831661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108831661
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108831661
Transfer RNA biogenesis [BR:
rsz03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108831661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Arg_repressor
Motif
Other DBs
NCBI-GeneID:
108831661
NCBI-ProteinID:
XP_056852934
UniProt:
A0A9W3CN88
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MAILSISFPLIVSSFLRPHASPRLLLLPRYLPRSPYRRFHRTAVSAVSSNVHHHPSYGKS
DDDNGSNSVSVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPSTFLRVLGPEPWN
VAYVEPSVRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFINSLSALGIDVTQHDIR
FVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQ
EVDHFKKILYADGITYGELFLENEKEMSSYFLEHASVDRLQKHFDYFDEEARSLLALGLP
IPAYDQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGVA
SEHIPPIHHGAALENVAEKVPEDPRSFIIEIGTEEMPPQDVINASEQLRVLVVQLLENQR
LRHGVAKAFGTPRRLVVLVDAMSPKQLEEEVEVRGPPASKAFDDQGNPTKAAEGFSRRYG
VPLEKLYRKVDGKTEYVHARVTQPARLALEVLSEELPGILAKISFPKSMRWNSSVMFSRP
VRWVMALHGDLVVPFCFAGNTSGNASSGLRNTASATLLVDTAESYEDTMRNAGIDIEIEE
RKKIILDKSNALAKSVNGRVIVHQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVM
QKHQKYFSITDESGKLLPYFIAVANGAINEDVVRKGNEAVLRARYEDAKFFYEVDTRKRF
SEFRDQLKGILFHEKLGTMLDKMNRLEKMVTKLCLALEVDEDLLPVVEGAASLALSDLAT
SVVTEFTSLSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPTTDAGMVLAIGDRLD
SLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKHALEIAASVQPINVEANT
LDDVYQFVTRRLEQLLVDNGISPEVVRSVLAERGNDPCLASRTAYKMEKLSKGEIFPKIV
EAYSRPTRIVRGKDLDVGVEVDESVFETSQEKELWNIYTSIKDRIHSGIGIEEFTEISTQ
LVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPSGIADLSFLPGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctctccatctctttccctctcatcgtctcctccttcctccgtcctcacgcc
tctcctcgccttctcctcctccctcgctacctccctcgatccccttaccgccgatttcac
cgcaccgccgtctccgccgtttcatcaaatgttcatcatcacccttcctatggcaagtcc
gatgatgataatggcagcaactccgtctctgttcctacattccaacaagcaattcaacgc
ctccaggagtattgggcttctgttggatgcgcagttatgcagcccagcaacaccgaggtt
ggagctggcactatgaatccttccacgtttttgagggttcttggccctgagccctggaat
gttgcctatgttgagcctagcgtacgtcctgatgatagtcgatatggagagaatcccaat
aggcttcaaaggcacactcagtttcaggtcatcttgaaacctgatcctggcaactctcag
gacctctttatcaacagtctctctgctttaggtattgatgtgactcaacacgatatccgg
tttgttgaagacaattgggagagcccggtgcttggtgcttgggggttgggatgggagatt
tggatggatggtatggaaatcacacaatttacttactttcagcaggctggaagccttcag
ctgtctccagtatctgttgaaatcacttatggccttgagcgcatcctcatgttgcttcag
gaagttgaccatttcaagaagatcttatatgctgatggaatcacttatggggagcttttc
ctggaaaacgagaaggaaatgagctcatattttctagagcatgctagcgtggaccgtctt
caaaagcatttcgactattttgacgaagaagcacgttccttgcttgccttaggcctccca
atccctgcgtatgaccagctactgaagacgtctcacgctttcaacatcttagatgctaga
ggcttcgttggtgtaactgaacgtgctcgttattttggtcgaatgcgcagcttggctcgc
caatgtgcccaactgtggttaaagacacgtgaatctcttggacatcctcttggtgttgcc
tctgaacacattcctcccattcatcacggagcagctttagaaaacgtggctgaaaaggtt
cctgaggatccaagatcatttatcattgagatagggactgaagagatgccacctcaagat
gttatcaatgctagcgaacaactcagggttttagtcgtacaattgctagagaaccaaaga
ttgcgccatggcgttgcgaaagcatttggcacacctcgtaggctagtggttttagttgat
gctatgtcccctaagcagctggaagaggaggttgaagttcgagggccccctgcgtctaaa
gcgtttgatgatcaaggaaatcctacaaaggccgcagagggttttagccgtagatatggt
gttccactggaaaaattgtacagaaaagttgatgggaagacagaatatgttcatgcacga
gttacacagccagctcgtcttgcattggaggtcctgtcagaagaattaccaggtatactg
gctaaaatatcgttcccaaagtcgatgcgctggaactcgtcagtaatgtttagcaggccc
gttcgctgggttatggccttacatggggatctggttgtaccattctgctttgctggcaac
acaagtggaaatgcttcttccggacttcgcaacactgcttcagcaacattgttggtagat
actgcagagtcctatgaagatactatgaggaatgctggaatcgatattgagattgaggaa
aggaagaaaatcattcttgacaagtcaaatgcattagcaaaaagtgttaacgggcgtgtt
attgtccatcagaacttactgaatgaggttgcaaatctcgttgaagctcctgtgccatta
attggaaagtttaaggaatcattcttagaactaccagaggagctattaactattgttatg
cagaagcaccagaaatatttttccattactgatgagagcggaaagctattgccttacttt
atcgctgttgccaatggtgcaataaatgaggatgtggtgaggaaaggaaatgaagcagtt
ctcagggcacgctatgaagatgccaagttcttctatgaggtggacacaagaaaaaggttt
tctgaatttcgagatcagcttaagggaattcttttccacgaaaagctggggacgatgctg
gataagatgaaccgtctagaaaagatggtaactaagctttgtttagccctcgaagttgat
gaagacctgcttccagttgtggagggggctgcttcacttgctctgtcagaccttgcaact
tctgtggttacagaatttacttccctgtcaggaataatggctcgtcattatgctctcaga
gatggctattcagagcagattgcagaagctttactggaaatcacacttcctagattttct
ggagatgtcatccctacaacagatgcaggaatggttttggcaataggtgatagattggat
agcctcgttggtctatttgctgctggttgccagccaagttcaacaaatgacccatttggc
cttagaagaatatcttatggcttagttcagattctggtcgagaaggataaaaatgtcaac
ttcaaacatgctctagaaattgcagccagtgtacaaccaataaatgttgaggcaaacact
ttagacgatgtatatcaatttgttactcgaagacttgaacagcttctggttgacaacgga
ataagccctgaagtagttaggtctgtcctagcagaacgtggaaatgatccttgtctggca
tcacgaactgcatacaagatggaaaagctgagcaaaggtgagatctttccgaagatagtg
gaagcatattctcgtcccacacgaattgtccgtgggaaagatcttgatgttggagttgag
gtggatgagagtgtatttgagacttcccaagagaaagagttgtggaacatttacacctcc
ataaaagatcgaattcacagtggcataggaatcgaggagttcactgagatatcgacgcag
ttggtggagccgctggaggattttttcaacaatgtatttgtgatggtggaggaagaaaga
gtgaggaagaacagactggctcttctaaataacattgccaatcttccctcaggaattgct
gacctttcatttttgcctggtttttga
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