Raphanus sativus (radish): 108831805
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Entry
108831805 CDS
T06014
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108831805
Transporters [BR:
rsz02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
108831805
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GFIT
Motif
Pfam:
MFS_1
OATP
Motif
Other DBs
NCBI-GeneID:
108831805
NCBI-ProteinID:
XP_018460814
UniProt:
A0A6J0LM13
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Position
4:33384598..33389202
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AA seq
544 aa
AA seq
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MNSLLLQVHQHDFCVVILFIIIFSQRLNQMVTKGEDCLPPATEPSRCYSPSSTTPLAELE
TIRSLEIVEPSFLSPVWLLVIFCIINLLNYMDRGAIASNGVNGSTQSCNDKGKCTPATGI
QGHYNLSNFEDGVLSSSFMVGLLIASPIFASLAKSFNPFRLIGVGLTVWTVAVLGCGSSF
AFWFIVLCRMFVGVGEASFISLAAPFIDDNAPHKQKAAWLGLFYMCIPSGVALGYVYGGY
VGKHFSWRYAFWGEAVLMAPFALLGFLLKPLQLKGFPSADSVEVMASSVGAEMSKNNNHL
QAGNEIEKDEVEVSIETYKSSSTNAIWKSITQFARDMKVLCKEKVFVVNVLGYVAYNFVI
GAYSYWGPKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGLILDHVTSTIPNAFKLLSGA
TFLGAICCFTAFTLKSLYGFIALFAIGELLVFATQLCLSLYLLLQAPVNYVCLHCVEPSL
RPLSMAISTVAIHIFGDVPSSPLVGIVQDHIDSWRKTALILTSVLFVAAAIWFIGIFINS
VDHF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacttttattacaagtccatcaacatgatttttgtgttgtgattctttttatc
attattttctcccaaagattgaatcagatggtgaccaaaggagaagattgtcttcctcct
gcaacagagccgtcaagatgttattctccttcttctacgactcctcttgcggagctagag
actattcgaagtttagaaatcgtggaaccatcctttctgtctccagtttggttgctggtg
attttttgcatcattaacttgttaaactacatggaccgaggtgcgatagcaagcaatggt
gttaatggaagtacccagagttgtaatgataagggcaaatgcactcctgcaactggaatt
cagggtcattataacctaagtaattttgaggatggtgtattgtcatcttctttcatggtt
gggcttcttattgcatcaccaatctttgcttccttggcaaagagcttcaatccatttaga
cttattggagtaggtttaactgtttggactgttgcagttcttggctgcggcagttccttt
gccttttggtttatcgtcttatgtcgcatgtttgttggtgtaggtgaagcttctttcatt
agtcttgcagctccatttatagatgataatgctcctcataaacagaaagctgcgtggcta
ggactgttttacatgtgtataccaagtggtgttgctcttggttatgtctatggcggatac
gtcggaaaacattttagttggcgctatgcgttttggggagaagctgttttaatggctcca
tttgctcttcttggtttcttgttgaaacctttgcagttaaaagggtttccttctgctgat
tcagttgaagtaatggcttcatcagtaggtgcagagatgtcgaaaaacaacaatcatctt
caagctggtaatgagattgagaaggatgaagttgaggtttccattgaaacttataagtca
agctccaccaacgcaatttggaaatcaataactcaatttgcaagagacatgaaagtccta
tgcaaagaaaaggtctttgttgttaatgtcttgggttatgtagcatacaactttgttatt
ggtgcatattcatattggggaccaaaggctggctataacatttataaaatgaaaaacgct
gatatgatctttggggcagtaactatcatttgtgggatcgttggaacattatcaggtggc
ttaatacttgatcatgtcacttccactattccaaatgctttcaagcttttatctggagca
acattcttaggggcgatatgttgctttactgcatttaccttgaagagtttatacggtttc
attgctcttttcgccataggagagcttctcgtgtttgctacacagctttgtctttcttta
tatctacttcttcaggctcctgtgaactatgtgtgtttgcattgtgtggaaccaagttta
agaccattatcaatggctatctccactgtcgctattcacatatttggcgatgttccatct
tcacctcttgtcggtatagttcaggatcatatcgacagttggagaaaaacagcgttgatt
cttacatcggttctgttcgtagctgctgcgatatggtttatagggatattcataaacagt
gtagatcacttttaa
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