Raphanus sativus (radish): 108832112
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Entry
108832112 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108832112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108832112
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108832112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
108832112
NCBI-ProteinID:
XP_018461107
UniProt:
A0A6J0LM90
LinkDB
All DBs
Position
4:2389230..2390913
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AA seq
195 aa
AA seq
DB search
MSRVYVGNLDPRVTERDLEDEFRIYGVIKSVWVARRPPGYAFLDFEDPRDARDAIRELDG
KNGWRVEQSHNRGGGGGGSRGGGDRGGDRGGRGGSDLKCYDCGEPGHFARECRNHGGTGR
RRSRSRSPRYRRSPSYGRRSYSPRGRSPPPPRRRSPSPPPARGRSYSRSPPPYRRRDELP
YANGNGLKDRRRSRS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgtgtacgtggggaatttggacccaagagttactgagcgtgatctcgaggat
gagttccgtatctatggagttatcaagagtgtttgggttgctcgcagaccacctggatac
gcttttctagactttgaggatcccagagatgcccgtgatgccatccgtgagttagatggc
aagaatggttggagggtggaacagtctcacaaccgaggtggtggtggtggagggagccgt
ggtggtggcgaccgcggaggagatcgtggtggccgtggtgggtctgatttgaagtgctat
gactgtggtgagcctggtcactttgcacgtgaatgccgtaaccacggtggcacaggaagg
cgtcgcagcaggagccggagtcctagatacaggaggagtccaagctacggacgcaggagt
tacagccctcgtggaagatctcctcctcctccaaggcgccgcagcccttcacctcctcct
gctcgtggtcgcagctacagtagatcaccgcctccgtacagaaggcgtgatgaactgcct
tatgctaatgggaatggactgaaagatagacgccgaagccggagctga
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