Raphanus sativus (radish): 108832124
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Entry
108832124 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108832124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108832124
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108832124
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108832124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Motif
Other DBs
NCBI-GeneID:
108832124
NCBI-ProteinID:
XP_056860000
UniProt:
A0A9W3D816
LinkDB
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Position
2:complement(5827433..5828846)
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AA seq
292 aa
AA seq
DB search
MAIPQRLHDEEEEDEIAEAAAGGVTRTRSETSSSTSSSSSSSSSEQQQQYVTLKSSDVLD
CPTCCEPLTTPIYQCANGHVACSSCCEALRKRCAFCRSHIGSIRCRAMEMVIESSTVQCR
YSLHGCGETTPYGRNQSSHEELCAFVPYSGSYADLKRHGRASHSEVVIPFALDRAQILGL
DRMAVLQEVEEGGDLVVVQAFEGVYGVSVTVSCVAAPMATTEVRDLFCSVAELDGCCSTV
RRLGLMVRRVQRVGEQEQPPGGFMLIPYDDKSCGGDHLMLQICISTESNFEL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccgcagagattacacgacgaggaagaagaagacgaaatcgctgaagctgct
gctggtggtgtaacgagaacaagatccgaaaccagtagcagcacgagctctagctcttct
tcttcttcatcggaacaacaacaacaatacgtaacgctgaaaagctccgatgtcctcgac
tgtcctacttgctgcgagccgctgacgactccgatttatcagtgtgctaacggccacgtg
gcttgctcctcgtgctgcgaggcgttgaggaagagatgcgcgttctgcagatctcacatc
gggagcatccgatgcagagccatggagatggtcatcgaatcatccacagtccagtgtcga
tactcattacacggttgcggcgaaacgacgccgtacggaagaaaccaatcaagccacgag
gagctctgcgctttcgtcccctacagtggatcatacgctgatctcaaacgccacggtcgc
gcttcgcactctgaggttgttattccgtttgcgttggatagggctcagatcttggggttg
gacaggatggctgttttgcaggaagtggaagagggtggtgatcttgttgtggttcaagct
ttcgagggagtgtatggtgtgtctgtgaccgtgagctgtgttgctgcgcctatggctacg
acggaagtgcgtgatctcttctgcagtgtagctgaactcgacgggtgttgtagcacagta
cgaaggcttgggttgatggtgaggagagttcagagagtgggagagcaagaacagcctcct
ggtgggtttatgttgattccgtatgatgataagtcgtgtggtggtgatcacttgatgctg
cagatttgtattagtactgaatctaactttgagctgtga
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