Raphanus sativus (radish): 108832273
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Entry
108832273 CDS
T06014
Name
(RefSeq) phosphoenolpyruvate carboxylase 4-like
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00620
Pyruvate metabolism
rsz00710
Carbon fixation by Calvin cycle
rsz01100
Metabolic pathways
rsz01200
Carbon metabolism
Module
rsz_M00168
CAM (Crassulacean acid metabolism), dark
rsz_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
rsz_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
rsz_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
108832273
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
108832273
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
108832273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
OKR_DC_1_C
Motif
Other DBs
NCBI-GeneID:
108832273
NCBI-ProteinID:
XP_056856735
UniProt:
A0A9W3CYR0
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MTDTTDDIAEEISFQSFEDDCKLLGSLFNDVLQREVGSSFMEKIERIRILAQSALNLRLA
GIEDTANLLEKQLTCEISKMPLEEALTLARAFTHSLNLMGIADTHHRMHKLIDATQLSRS
CDDTFTQLLHSGISSEELYKTVCKQEVEIVLTAHPTQINRRTLQYKHVRIANLLEYNSRS
DIGHEDRETLIEDLVREITSVWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRV
SNSLKKFTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKEVSLLSRWMAIDLYIREVD
SLRFELSTNRCSDRFSRLAEDILEKESSEKDSDRGQSSFLNQQNSSLLTQLPDKAQHPSC
IEDGDSQHSKFEINSTTDFVPPNLQKQNEEDSPKIDSKPNADDTHTAGLTSRGSFSSTSQ
LLFQRKLFAESKIGRASFQKLLEPPPLKRAGMAPYRIVLGDVKDKLVKTRKLLELLLEGL
PCEYDPRVSYETSEQLLEPLLLCYESLQSSGAGVLADGKLADLIRRVSTFGMVLVKLDLR
QESARHAEALDAITTYLDLGTYSEWDEEKKLDFLTKELKGKRPLVPPTIEVVPEVKEVLD
TFRVAAEFGSESLGAYVISMASNASDVLAVELLQKDTRLAVTSEHGKPCPGGTLRVVPLF
ETVKDLRAAGYVIRKLLSIDWYREHIQKNHNGHQEVMVGYSDSGKDSGRFTAAWELYKAQ
EDVVAACNEFGIKITLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKF
GIPQTAVRQLEIYTTAVLLATLKPPQPPREQKWRNLMEEISTISSQNYKGTVYENPEFIS
YFHEATPQAELGYLNIGSRPARRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKG
VSEKGYADDIQEMYKEWPFFQSTIDLIEMVLAKADIPITKLYDEQLVSESRRGLGDMLRK
ELLTTEKYVLVITGREKLLESNKSLKKLIESRLPYLNAMNMLQVEVLKRLRRDEDNNKLR
DALLITINGIAAGMRNTG
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgacggatacgacagatgatattgcagaggaaatctcattccaaagtttcgaagatgac
tgcaagttgctcggaagtctctttaatgatgtgttgcagagggaagtcggaagctcattc
atggagaaaatcgaacgcattcgaatcctcgctcagagtgcgttgaatttgcgtttggct
ggtattgaagatactgcaaaccttttagagaagcaactgacttgtgaaatatccaagatg
ccactagaggaagctttgacattggctcgtgcattcactcactctcttaaccttatgggc
attgcagacactcatcacagaatgcataaactcatagacgccacacaactttcaagatca
tgtgatgatacattcactcagctattgcatagtggaatttcctcggaagagctttacaaa
acggtttgcaagcaggaggtcgagattgttcttactgctcatcctactcaaattaaccgg
agaaccttacagtacaagcatgtcagaattgctaatcttttagaatataacagcagatca
gatatcggccatgaagatcgagaaaccctcattgaagatttggttagggagataacttca
gtatggcagactgatgagcttagacgtcaaaaacctactccagttgatgaagctagagct
ggtttgaacattgttgagcaatccctttggaaagctgtaccacattacctgcgtcgtgtc
agcaattccttgaaaaagttcacggggaagccacttccattaacatgcacgcctataaaa
tttggttcttggatgggaggtgatagagatggaaacccaaatgtgacggcaaaggtcacc
aaggaagtatctctcttgtccaggtggatggctatcgatctgtacataagagaggttgat
agcttaagatttgaattgtctacaaatcgatgcagtgacagattttcaagattagcagag
gacattcttgaaaaagagagttctgaaaaagattctgacagaggacaatcaagtttctta
aaccagcaaaattcatccttgctaacacagcttccagataaagctcaacatccttcttgc
attgaagatggtgattcacaacattccaaatttgaaatcaattcaacgacagattttgtg
cctccaaatctccagaagcaaaatgaagaagactctccaaagatcgattcaaagccaaat
gctgatgatactcatacggcaggtcttacttcgcgaggttctttctcatctacatctcaa
cttctcttccagaggaaactatttgcggaatctaaaattgggagggctagttttcaaaag
ctactagaaccacctccacttaaacgtgctggaatggctccttaccgtattgtacttgga
gatgttaaggataagcttgtgaagacacgaaaactccttgaacttctacttgagggtctt
ccttgtgagtatgaccctagggtatcgtatgaaacgtcggagcaacttctagaaccattg
ctcctctgctacgaatcactgcaatcatccggtgctggtgtgctagctgatggaaaactt
gctgatctgatccgtagagtttctacatttggcatggttttggtgaaacttgatttacgt
caggaatctgcaaggcatgctgaagctttggatgcaattacaacatacttggaccttggt
acttatagtgaatgggatgaagagaaaaaactagatttcttgacaaaagaacttaaaggc
aaacgaccccttgttcctcccactattgaggttgttcctgaagttaaagaagttttggac
acattccgagttgctgctgagtttggaagtgaatcacttggagcttatgttatttccatg
gcttcaaatgcaagtgatgtcctggctgtggagcttctgcaaaaagatactcgacttgcg
gtcactagtgaacatggaaaaccatgtcctggtggaacgctgcgagtggttcctcttttt
gaaacggtgaaggatctaagagcagctggttatgttataaggaaactgctttcaatagat
tggtacagagaacacatccaaaagaatcataatggtcaccaagaggtgatggttggatac
tctgattcaggaaaagattctggacgctttactgctgcatgggaactttacaaagctcaa
gaagatgttgttgctgcttgcaatgagtttgggatcaaaattactttgttccatggacga
ggaggaagtattggtcgtggtggtggcccgacctatctcgccatacaatcccaaccacca
ggctccgtaatgggcactttgcgttcaactgagcaaggtgagatggttcaagccaagttt
ggtataccacaaacagctgttaggcaactagagatatacacaacggcggttctacttgct
accttaaagcctcctcaaccgcctcgagagcaaaaatggagaaatctaatggaagaaatc
tcaacaatcagttcccaaaactacaaaggcacagtctatgaaaacccagagtttatctca
tacttccatgaggcaacaccacaagccgagctcggttacctcaacataggaagccgacca
gcgagaagaaagagctcaactggcataggacatcttagagctatcccttgggtctttgct
tggacacaaacaaggtttgttctaccagcttggctcggtgtaggagctggtctaaagggt
gtctctgagaagggttatgcagacgatattcaggagatgtataaagagtggccatttttc
cagtcaactattgaccttatagagatggtgttagccaaagcagacatccccattacgaaa
ctctatgacgaacaacttgtctctgagagcagaagaggacttggtgatatgctgaggaaa
gagttgttgactactgaaaagtatgtgcttgtgataaccggccgtgagaaactcttggag
agcaacaagagcttgaagaaactcatagagagtagacttccgtatcttaacgctatgaac
atgttgcaagttgaagtacttaagaggctaagacgcgatgaagataacaataagcttagg
gatgctttgctaatcacaatcaatggtatcgccgcaggaatgagaaacacaggttaa
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