Raphanus sativus (radish): 108832448
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Entry
108832448 CDS
T06014
Name
(RefSeq) cryptochrome-1
KO
K12119
cryptochrome 2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108832448
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
108832448
NCBI-ProteinID:
XP_056851297
UniProt:
A0A9W3CIF5
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Position
2:4334597..4337664
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AA seq
619 aa
AA seq
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MSTNKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL
AHLSQSLKALGSQLTLIKTHNTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLV
QRGVSVQSYNGDLLYEPWEIYCEKGKPYTSFNSYWKKCLDMSVESVVLPPPWRLVPLTAA
ETVWACSIEELGLENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVG
NSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEGEESADLFLRGIGLRDYSRYIC
FNFPFTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVI
VSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGA
KYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELL
TKAISRTREAQIMIGAAPDEIVADSFEALEAANTVKEHGLCPSSNDQQVPLDVRYNGSKR
VKPVEEDEEREMKKLRGFNEVIREEEERGLFSTAESSSSSSVRSVFMVSHSCSLVSEGKN
LEGIQDSSDQIATSLGKNG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaacaaaaagacgatagtttggttcagaagggacctaaggatagaggataac
cctgcattagcagccgctgctcacgaaggatccgtgttccctgttttcatctggtgtccc
gaagaagaaggacagttttatccaggaagagcttctagatggtggatgaaacaatcactt
gctcacttgagccaatccttgaaggctcttggttctcagcttactttgatcaaaacccat
aacaccgtttcagctatcttggactgtgttcgtgcaaccggtgctactaaagtcgtcttt
aatcacctctacgatcctgtttcgttggttagggaccataccgtgaaggagaaactagtg
caacgtggtgtctctgtgcaaagctacaacggtgatctattgtatgagccgtgggagata
tactgtgaaaagggcaaaccttatactagttttaattcttactggaagaagtgcttagac
atgtctgttgaatccgttgtgcttcctcctccttggcgcttggttcctctcactgcagct
gaaacggtttgggcgtgttcaattgaagagctaggactagaaaacgaggccgagaagccg
agcaatgcgttgctaaccagagcttggtcaccagggtggagcaacgctgacaagatacta
aacgagttcatcgagaagcagctcatagactacgcaaagaacagcaagaaagtcgttggg
aactcgacgtcgctgctctctccttatctccatttcggggagataagcgtcagacgcgtg
ttccaatgcgctaggatgaaacagatcatatgggtgagagacaagaagggtgaaggagaa
gaaagtgctgatcttttcctcagagggatcggtctaagagactactctcgttacatatgt
ttcaacttcccttttactcacgagcagtctttgctgagtcatctccgtttcttcccttgg
gatgctgatgtcgagaagttcaaggcgtggaggcaaggcaggactggttatccgttggtg
gatgctgggatgagagagctttgggctactggatggatgcataacaggattagagtgatt
gtttcgagctttgctgtgaagtttcttctccttccgtggaaatgggggatgaagtatttt
tgggatactcttttggatgctgatttggagtgtgacatcattggatggcagtatatctcc
gggagcttgcctgatggccacgagcttgatcgcttggacaatcctgcaatacaaggagca
aagtatgacccggaaggagagtacataaggcaatggctacccgagctggcgaggttgcca
actgaatggatccatcatccatgggacgctccattaaccgtactcaaagcttccggtgtg
gaactcggaactaactacgccaaacccatcgtagatatcgacacagctcgtgagctgctg
accaaagctatatcaagaactcgtgaggcacagatcatgatcggagcagcgcctgatgag
attgtagctgatagcttcgaggccttagaggctgctaataccgttaaagaacatggtctt
tgcccgtcgtctaatgaccagcaagtaccgttggatgttcgttacaatgggtcaaagaga
gtgaaacccgttgaagaagatgaagagagagagatgaagaaacttagaggattcaatgaa
gttattagagaagaagaagaaaggggtttgttttctactgctgagtcttcttcttcttcg
agtgttaggagtgtgttcatggtttctcattcttgctcgctcgtatcagaagggaagaat
ctggaaggtattcaagattcttctgatcagattgctacaagtttggggaaaaatggttag
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