Raphanus sativus (radish): 108832478
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Entry
108832478 CDS
T06014
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108832478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108832478
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108832478
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108832478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-TRAF
choice_anch_I
DUF4729
Motif
Other DBs
NCBI-GeneID:
108832478
NCBI-ProteinID:
XP_018461460
UniProt:
A0A6J0LMJ0
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All DBs
Position
4:34712634..34713806
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AA seq
274 aa
AA seq
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MASISEDNNNSTSRKRQRSQTEGTATLLDLDFTDCPICFNLLTIPIFQCDNGHIACSTCC
EKLSQKCATCSLPTLSRNRAMERVLELLRVRCPNAGCSMVVSCSGTSAHVDHCPFTQRTC
PFSSCDFTCSFKDLYKHSLAKHSIAAPHLAKLGVSFSSLMFKCGTLVRIHLTANKRIILK
EQTTTKGEGEIVVVEGFDRPDGRMFYACCIGPGTDKFSYQLKLSLASGDDLLYDSNLQRV
REVSNEPPLANFMLVPSCMLPYRICYICIKRKTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtatatccgaggacaacaacaacagcacttcgagaaagaggcaacgttctcag
accgaaggcactgcgacactgctggatctggattttaccgactgtcccatctgctttaat
cttctcaccattcccatcttccagtgtgataatgggcatatagcatgctctacttgctgc
gaaaagttaagccagaagtgcgcaacatgctccttacccactctttcccgcaacagagcg
atggagcgtgttcttgaactacttagagttcgatgtccgaatgctggttgctccatggtc
gtctcttgttctggaacatcagcacatgtggatcactgtccattcacccaacgcacttgc
ccttttagcagctgtgactttacttgctccttcaaggatttatacaaacacagccttgct
aaacacagcattgcggcaccacacttggctaaacttggcgtttccttctcctcgctcatg
tttaaatgtggaacgctcgtgcgtattcatctcacagcgaataagaggatcattctcaag
gaacagactactacaaaaggagaaggagaaattgtggttgttgaagggttcgataggcca
gacggtcggatgttctatgcctgctgtattggaccaggaacagacaagttctcctaccaa
ctcaagctatctttagcttccggtgatgacttgttgtatgactcaaacctccaaagagtt
cgtgaagtgagcaatgaaccaccacttgcgaattttatgttggttccttcatgtatgttg
ccttaccgcatatgttatatatgcatcaagcggaagactaactag
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