KEGG   Raphanus sativus (radish): 108832677
Entry
108832677         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108832677
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108832677
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108832677
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108832677
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-Nse zf-rbx1 Prok-RING_4 TerY_C RING_XB3-XBAT31 Zn_ribbon_6 TRAF3_RING zf-RING_4 Zn_ribbon_19 zf-ANAPC11 zf-RING_10 zf-RING_6 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 108832677
NCBI-ProteinID: XP_056845371
UniProt: A0A9W3C170
LinkDB
Position
6:1877399..1878992
AA seq 189 aa
MTINGSMIFSLLTNLNYQLLEVRGGNKNNSSSIPSEDERDQGDDDDDDDDVVESTASAFD
RAKRDKSRGSRRGPFVVDLDSGCTTKVSKNPSQDQSDQANDELNDSANAFVSVLFQRKSN
KAVVAPVEEPKFNCPICLGPFTEEMSTKCGHIFCKSCIKDAISRQANCPTCRKKVTAKGL
IRVFLPTTE
NT seq 570 nt   +upstreamnt  +downstreamnt
atgacgataaatgggagcatgatcttttcactactgacaaacctcaactatcaattacta
gaagttcgaggagggaacaagaacaacagcagtagtataccaagcgaagacgagcgagat
caaggtgatgatgatgatgatgatgatgatgttgttgaatcaactgcttctgcttttgac
cgagctaaaagagacaaatctagaggctcacggcgaggtccctttgtagttgatttagat
tcaggttgtactactaaagtaagcaaaaacccctcacaggatcagtctgatcaagctaat
gatgagcttaacgattcggctaacgcatttgtctctgtcttgtttcagaggaagtctaat
aaggctgttgtggctccagtagaggaaccaaagtttaactgcccaatttgtctgggtcca
tttaccgaggagatgtcaacaaagtgtggtcatattttctgcaaaagttgcataaaggac
gccatctctcgtcaagctaattgccctacatgcaggaagaaggttactgctaaaggcctc
attcgagttttccttccaaccaccgaatga

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