Raphanus sativus (radish): 108832728
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Entry
108832728 CDS
T06014
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00730
Thiamine metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
108832728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108832728
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
108832728
Ribosome biogenesis [BR:
rsz03009
]
Prokaryotic type
GTPases
108832728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
eIF-1a
nSTAND1
AAA_29
AAA_21
AAA_16
Rad17
IIGP
AAA_23
Motif
Other DBs
NCBI-GeneID:
108832728
NCBI-ProteinID:
XP_018461682
UniProt:
A0A6J0LNV9
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MQISSLSIIRHSSPSFLRRAAIHHGGCGVRIGIGIGIRRSFHHLLTLSARRDNNPDVSRK
PQPSKNMLRAKHNIGKDHSSLAPVLSPDHNPSLLASQAIGTVATAQANFMRVVVSEDRSS
SSSKEGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWDDGRGMIENVFQRRSEILDPPVA
NVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKCELITEEELESWKMRLRGW
NYEPFFCSVGTKEGLDAIALVLRDQTSVIVGPSGVGKSSLINVLRTSGGVQDDNWFEPII
GNNKWFEDQRVGEVSTRSGRGKHTTRNVSLLPITEGGYLADTPGFNQPSLLKVTKHSLAL
CFPEIRKMIEEEKCGFKDCLHIGEPGCVVKGEWERYPYYLQLLDEIRVREDFQLRTFGTK
REGDVRYKVGGMGVKQAEPRLQPKKHRRESRKKVKQTRISELDEFEDEESDWDIEDDPIV
QAIENEKER
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatcgtctctctccatcatccgccactcttctccttccttcctccgccgcgcg
gcgattcaccacggtggatgcggagttcgaatcggaatcggaatcggaatccgccgcagc
ttccatcatcttctcacgctctcagcgagacgagacaacaaccccgatgtctccagaaaa
ccccagccgagcaaaaacatgctcagagcgaagcacaacatcggcaaagaccactcctcc
ttagctccggtgctctctcccgaccacaatccttcgctcctggcctctcaggccatcggc
accgtcgccaccgctcaggcgaacttcatgcgcgtcgtcgtcagtgaagatcgttcttcc
tcttcgtctaaggagggagtagagctgctttgcgtggtgagagcggtgctgaagaagata
cggaggagagttctggttggggataaggtcctcgttggatctatcgattgggatgatggg
agagggatgatcgagaacgtgtttcagcgccgctccgagatcctcgatcctcccgtggcg
aatgttgatcacttgctcgttctcttctcgcttgatcagccgaagcttgagccgttcacg
ctcactaggttcttggtggaagctgagtccactgggattccactcacactcgccttgaac
aaatgtgaactcatcaccgaagaggaattggaatcttggaagatgagactgcgtggatgg
aactacgaaccgttcttttgcagcgtgggaactaaagagggacttgacgccattgcgttg
gtcttgagggatcagacttctgtgattgttggacctagtggtgttgggaagtcgagttta
atcaacgtattgaggaccagtggtggcgttcaagacgataattggtttgagcctataata
ggtaataataagtggtttgaagatcagcgagttggtgaagtttcaactagaagtggtaga
ggcaaacacactactcgaaatgtgtctctgctgccgattactgaaggtggttatctcgcc
gatactcctggatttaaccagcctagtttactgaaagtgaccaagcattcacttgccttg
tgttttcctgagataaggaaaatgatagaggaagagaaatgtggtttcaaagattgcttg
catattggggaaccaggatgtgtagtgaaaggagaatgggaaaggtatccttactactta
caactgcttgatgagatcagagtcagggaggactttcagcttaggacttttggtaccaaa
agggaaggcgatgttaggtacaaagtgggagggatgggtgtgaaacaagctgaaccgcgg
ttacagccgaagaagcataggagagagtcgaggaagaaggtgaaacagacaaggatcagt
gagctagacgagttcgaagatgaagaaagcgactgggacatagaggacgacccaattgtc
caagccattgagaacgagaaagagagatga
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