Raphanus sativus (radish): 108832834
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Entry
108832834 CDS
T06014
Name
(RefSeq) myosin-16 isoform X1
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108832834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108832834
04131 Membrane trafficking [BR:
rsz04131
]
108832834
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108832834
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108832834
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108832834
mRNA cycle factors
P-body specific factors
108832834
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108832834
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108832834
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108832834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
CbiA
AAA_19
Motif
Other DBs
NCBI-GeneID:
108832834
NCBI-ProteinID:
XP_056865315
UniProt:
A0A6J0LPS2
LinkDB
All DBs
Position
4:complement(48606130..48613728)
Genome browser
AA seq
1241 aa
AA seq
DB search
MGENILVDSHVWVEDPETAWTHGVVVNIKGDEADVKTNDDREVIAKLSKLYPKDDEAPSE
GVEDMTRLSYLHEPAVLNNLATRYELNEIYTYTGNILIAVNPFQGLPHLYDAEVMEKYKE
ASFKELSPHVFAIGGIAYREMINEDRNKCILVSGESGSGKTETTKMLMRYLAFFGGHTAG
EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDVGRISGAAIRTYLLERS
RVCQVSDPERNYHCFYLLCAAPPEDVERFKLGDPKSFRYLNQSSCYELDGVNDAEEYLAT
RKAMDVVGISETEQDAIFRVVAAILHLGNIEFCKGEDADSSSLKDEQSNFHLQMTSELLM
CDPHSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQ
DSQSRRLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQSEYEKEEIDWS
YVEFVDNKDVVDLIEKKPGGIIALLDETCMLPKSTPETFSEKLYQTFKNHKRFIKPKLTR
SDFTLVHYAGEVQYQSDQFLDKNKDYVVAEHQDLLNASKCSFVSGLFPPLPKASSKSKFS
SIGARFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPTVFDNANVLHQLRSGGVLEAIRVK
CAGYPTNRTFIEFLKRFMILAPEILKGEYEADVACKWILDKKGLTGFQIGKSKVFLRAGQ
MAELDAHRTKVLGEAAKMIQGQVRTRLTRERYVLLRRASVNIQANWRANLARKISRYMRR
EEAAIKIQKNLRRQIAIKDYGNTKSSAVTLQSGVRTMVARHEFHYKLKSKAATVIQAYWR
GYSAVSDYKKLKKASLVYQSKLRGRIARKQLGQSNQAEEKKETEHERDVELSNPAKEAVD
KSFEKHSDESDDEEMRHERETKHSIQADDGIEKSFVKHAEHSDEEEIGQTKHSIQADDAI
EKSFVKHSDESDDEEIGHEREKKHTNQGDDGIEKSFVMHSEHSSDEEKGHEQQTTHTIQG
DDGVEKSFVMHSDHSSDEEKGHERQKEHTIQADDGIEKSLILDSKNPFSNFSDVSHITNP
FRDTEVESLTAEVEMLKALLVVEKQRADISERKCDEARELGERRRKRLEETERRVYQLQD
SLNRLLYSMSDQFSQLKSILRSPSMSSTLASVPVVRDDLADSSENSEASSTESDFTFPAP
SSSSADNPNQLQVIVQDLSTTEAKGTENSDSKKKGGFEDYF
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaacatattggtggattctcatgtttgggtggaagacccagagactgcttgg
actcatggggttgtagttaatatcaagggagacgaagcagatgttaaaaccaatgatgat
agagaggttattgctaaactatcaaaactctatccaaaagacgatgaagctccttcagag
ggagtagaggacatgacaagattatcttatctccatgagcctgcagttctcaacaacttg
gctaccagatatgagctgaatgaaatttatacttatacaggaaacattcttattgctgtc
aatccctttcaaggactccctcatctctatgatgctgaggttatggagaagtacaaggaa
gcctccttcaaagaattgagtcctcatgtttttgcaattggtggcattgcatatagggaa
atgatcaatgaggataggaataaatgtatattggtcagtggtgaaagtgggtctggaaag
acagagacgactaagatgctcatgcgttaccttgcattctttggagggcatactgcaggt
gaaggaaggactgttgaaaaccaagttttagaatcaaatccagttctcgaggcatttgga
aatgcgaagactgtgaagaacaacaattccagtcgttttgggaaatttgtggagattcag
tttgatgacgtgggtcggatatctggggcagccatcagaacctaccttttggagaggtct
cgtgtttgccaagtgtcagatcctgaacgcaattaccactgcttttacctcctgtgtgct
gctcctccagaggatgttgagagatttaaattgggcgaccccaagtcatttcggtatctt
aaccaatctagctgctacgaacttgatggtgtaaacgatgcagaggagtatcttgctact
agaaaagctatggatgtagttggaataagtgaaacagaacaggatgcaattttcagagtt
gtggctgccattctccatcttggaaatattgaattttgcaagggagaagatgctgattca
tcatctctaaaagatgaacagtcaaattttcatctccaaatgacatcagaattgctcatg
tgtgatcctcattccttagaagatgctttgtgcaagcgtatgatggtcaccccagaagaa
gttatcaaaagaagtcttgatcctcttggtgccgctgttagtagggatggtttagcaaag
acaatatattctagactctttgattggttggtaaacaaaataaacatctctatcgggcaa
gattctcagtctaggcgcttgatcggagtccttgacatttatggttttgagagctttaaa
accaatagttttgaacagttctgtattaactacacgaatgaaaagctgcaacaacatttc
aaccagcatgtattcaaaatggaacaaagtgaatatgaaaaagaagaaatagattggagc
tatgtggagttcgttgataacaaagatgtcgtggatctgattgaaaagaagcccggtggt
atcattgctcttctagatgaaacatgcatgctacccaaatcaactcctgaaacattttct
gagaagctgtatcaaacattcaagaatcataagcgcttcattaaaccaaaactgactcga
tcagattttactttagttcattatgcaggggaggttcagtaccagtccgatcagttttta
gacaaaaacaaagactatgttgttgccgagcatcaggatttgttaaatgcttccaaatgt
tcttttgtgtcaggactttttcctcctcttcctaaagcgagtagcaagtctaagttttcc
tccattggcgctcgtttcaagctacaattgcaacagctgatggagacgctgaatttaacg
gaaccgcactacatcagatgtgttaagccaaacaatttgttgcagccaacagtgtttgac
aatgccaatgtcttgcatcagttacgctctgggggtgttcttgaggccatcagagtgaaa
tgcgctggatatccaacaaataggactttcatcgaattcttaaaacggtttatgattctt
gcaccggagattctgaaaggagagtatgaagcagatgttgcatgcaagtggattttggac
aaaaaggggctcacaggtttccaaattggaaaaagtaaagttttcctgagagctggtcag
atggctgagctagatgcacacagaacgaaagtcctcggtgaagcagcgaagatgattcaa
gggcaagttagaacccgtctcacaagagaacgatatgtgctcttgcggagggcttcagtt
aatatacaagctaattggagagcaaaccttgcacgaaagatatcaaggtacatgagaagg
gaggaagctgccattaaaattcagaaaaacttacgtagacagattgcaattaaagattat
gggaataccaaatcttcggcagtcacgttgcaaagtggagtccggacaatggttgcacgc
catgagttccattataaattgaagtctaaggcagcgactgtgatccaggcttactggcgt
ggttacagtgctgtatctgactacaagaaactgaaaaaagcttctcttgtttatcaaagt
aaactcagaggaagaattgctagaaaacagttgggacagtcaaatcaggctgaggaaaag
aaagagacagaacatgaaagagatgtggaactttccaatccagcaaaagaggcagttgat
aagtcctttgaaaagcattcagatgaaagtgatgatgaagagatgagacatgaaagagag
acaaaacattccatccaagcagatgatggcattgaaaagtcttttgtaaagcatgcagag
catagcgatgaggaagaaataggacagacaaaacattccatccaagcagacgatgcaatt
gaaaagtcctttgtaaagcattcagatgaaagtgatgatgaagagataggacatgaacga
gagaaaaaacataccaaccaaggagatgatggaattgaaaagtcctttgtaatgcattca
gagcatagtagtgatgaagagaaaggacatgaacaacagacaacacataccatccaagga
gatgatggagttgaaaagtcctttgtaatgcattcagaccacagtagtgatgaagagaaa
ggacatgaacgacagaaagagcataccatccaagcagatgatggaattgaaaagtcattg
attctggattcaaagaaccctttcagcaatttttctgatgtaagccatataacaaaccct
ttccgtgatacagaagttgagtcccttactgccgaagttgagatgttgaaggccttgttg
gtagttgagaaacagagagctgacatttccgaaagaaagtgtgatgaagcacgagaactt
ggtgagagaagacgcaaaagattagaagaaacagaaagaagagtttaccaactacaagac
tccttgaacaggttgttatattctatgtcggaccagttctctcaactgaagtccatcctg
agatctccttctatgtcttcaacgttggcttcggtgcccgttgtacgtgatgatcttgct
gacagctctgagaactctgaagcttcatcgactgaatctgatttcacatttccagctccc
tcttcttcttctgcagataatccaaatcagctgcaagtcattgttcaagatctatcaacc
acagaggccaaaggaacagagaactctgacagtaagaagaaagggggctttgaagattac
ttttga
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