Raphanus sativus (radish): 108832934
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Entry
108832934 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108832934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108832934
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108832934
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
108832934
NCBI-ProteinID:
XP_018461888
UniProt:
A0A6J0LPV5
LinkDB
All DBs
Position
5:33159972..33162226
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AA seq
280 aa
AA seq
DB search
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYKDEAHKAVERLDGREVDGREITVQFAKYGPNAEKISKGRVVEPPPRSRRSRSRS
PRRSSSPYRRRSPRRSRSPRRRSRDDYRERDYRKRSRSRSNERRDRHHDKDRDYRRRSRS
RSASPDDKRRVRGRYDDERRSRSRSLSASPPRRSSRSPRSASPLKASPERRSKERSLTPV
PRSRSPRSPSMEKASPERKSNDRSPSPRDTARSQSPNAEE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaaggtcaggtccgccggacatcagcgacacctactctcttctcgtc
ctcaacatcaccttccgtacgactgcagatgacctctatcctctattcgcgaagtatggc
aaggtcgtggatatcttcatccccagagatcgaaggactggtgattcgcgtggttttgcg
tttgttcgatataagtataaagatgaagctcataaagctgtggaaaggcttgatggacga
gaggttgatggtagagaaattactgttcagtttgcaaagtatggccctaatgctgagaag
atttccaaaggaagagttgtggaaccacctccaaggtcacgaaggtcaagaagccgtagt
cctcgaaggagcagtagcccttatagacgccgtagtcctaggagaagccgcagtccccgc
aggaggtcccgagatgattacagggaaagagactacaggaagaggagcagaagtagaagc
aacgaaaggcgtgataggcatcatgacaaggatagagattaccgccgtcgcagtaggtct
cgtagtgccagcccagatgacaaacgcagagtcagaggccgttatgatgatgagagacgc
agtcgcagtcgctccttgagtgcgtctccccctcgccgcagcagccgcagccctagaagt
gcctccccactaaaagcctctcctgaaaggcgaagcaaagagaggtctctaactcctgtt
ccccgcagccgtagcccaagaagtccttccatggaaaaggcttctcctgagaggaagagc
aatgataggtccccatctcctcgggacacagctcgtagtcaatctcctaatgcggaggaa
tga
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