Raphanus sativus (radish): 108833270
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Entry
108833270 CDS
T06014
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 59
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108833270
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108833270
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Motif
Pfam:
Pectinesterase
PMEI
End_tail_spike
Pect-lyase_RHGA_epim
DUF3642
Motif
Other DBs
NCBI-GeneID:
108833270
NCBI-ProteinID:
XP_056856860
UniProt:
A0A9W3CZ24
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Position
2:complement(9553459..9557208)
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AA seq
547 aa
AA seq
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MNMLLMHKIYLLSFRLVLLLLCFHPLTTVAADDNFTTGGIDGWCDQTPYPDPCKCYFRNH
NGFRLPTQLSEFRIMLVEATIDRAISARDELTQSSRNCTDCRKQAVLADCIDLYGDTIVQ
LTRTLEGVSPKAGTKKRCTDFDAQTWLSTALTNTETCRPGSSDFNVSDFITPIVSNTKIS
NLISNCLAVNGGLLPTGSNSTTTAGGKGFPTWVSGKERRLLQLKSARAVPANLVVAKDGS
GHVTTVQAAIDLAGRRKVTSGRYVIYVKRGIYQENINVRLNNDNVMLVGDGMRSTIITGG
RSVKGGYTTYNSATAGIEGLHFIAKGLTFRNTAGPDKGQAVALRSSSDLSIFYKCSIEGY
QDTLMVHSQRQFYRGCYIYGTIDFIFGNAAVVFQNCLILPRRPLKGQANVITAQGRADPF
QNTGISIHNSRIQPAPDLKPVIRTVKTYMGRPWMKYSRTVVLKTHLDSFVSPLGWSPWNE
GSVFGLDTLFYAEYKNTGPASSTTWRVRWKGFHVLNTDSDASAFTVGRFIAGTAWLPHTG
VPYTSGL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgttgttgatgcacaaaatatatcttttatcatttcgtctagtattgttattg
ctctgcttccatcctctcaccactgtagctgccgacgacaatttcaccaccggaggcatt
gacgggtggtgcgaccaaactccttaccctgatccatgcaaatgctacttcagaaaccac
aatggtttccggcttccgacacagctatccgagttccgaataatgctggtggaagcaacc
atagatcgggctatatccgcccgggacgagctgactcagtccagccgcaactgcacagat
tgccggaagcaagccgttttagctgattgcattgacctatatggagacacgattgtgcag
ctaacccggacgctggagggagtatctccaaaagccggtacgaagaaaaggtgtaccgac
tttgacgctcagacttggctgagcaccgcacttactaataccgagacttgtcgacccggc
tcttccgatttcaacgtctcagatttcatcacaccaatcgtatcaaacacaaaaatctcc
aaccttataagcaactgcttagcggtcaacggaggcctcttaccaaccggaagcaatagc
accaccactgctggtgggaagggttttccaacgtgggtttccggtaaagaaaggaggctt
ctacaattaaaatccgcgcgggctgtaccagctaatctcgtagtggccaaagacggatcg
ggacatgtcacaacggtgcaagcggctatagacctggctggacggagaaaggtgacgtca
ggaaggtatgtgatatacgtgaagagaggaatatatcaagaaaacataaacgtacgtctc
aataacgataatgtaatgttggtcggagatggaatgagatccaccattatcaccggtggt
cgtagtgtcaaaggtggttacaccacttacaattccgccactgccggtatagaaggactt
cacttcatagccaaaggcctaacattccggaacacggctggtccagacaaaggccaggcc
gtggcactccggtcatcctcagacctctcaatcttctacaaatgctcaattgaaggatac
caagacacattaatggtacattcccaacggcaattttaccgtggctgctacatttatgga
accatagatttcatatttggaaacgcagccgttgttttccaaaactgtctcatcctccct
cgccgcccgctcaagggtcaggccaatgtaataaccgcacaaggtcgtgctgatccattt
cagaacacagggatctctatacataactcaagaatccaacccgcccccgatctaaaaccg
gtgatccgtactgttaagacgtacatggggcggccttggatgaagtactcacgcaccgtg
gttcttaagacgcatttagatagtttcgtgagtccgttgggttggtcaccgtggaatgaa
ggttcggttttcggtttagacacgcttttctatgctgaatataagaataccggaccagct
tcatccactacgtggcgtgttcgttggaaagggtttcatgtgttgaatacagattctgat
gcatccgctttcactgttggaagattcattgcaggtacagcatggctgccgcacacaggc
gtaccctacacttccgggctctaa
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