Raphanus sativus (radish): 108833708
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Entry
108833708 CDS
T06014
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz03015
mRNA surveillance pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108833708
09122 Translation
03013 Nucleocytoplasmic transport
108833708
03015 mRNA surveillance pathway
108833708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108833708
03041 Spliceosome [BR:
rsz03041
]
108833708
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108833708
TREX complex
108833708
Spliceosome [BR:
rsz03041
]
Complex C
Other components
EJC/TREX
108833708
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108833708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
API5
Motif
Other DBs
NCBI-GeneID:
108833708
NCBI-ProteinID:
XP_018462617
UniProt:
A0A6J0LRI8
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Position
9:complement(5586555..5588228)
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AA seq
247 aa
AA seq
DB search
MSTGLDMSLDDMIAKNRKSRGSGPARGSGSGSGSGPIRRNNPNRKSNRSAPYQSAAKAPE
STWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVH
FDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGNA
NNFGGASSRRGGQGRGGQQRRGGGGGGQGGRGGGRGRRSGKGPTEKVSAEDLDADLDKYH
AGDMETN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactggattagatatgtctctcgacgacatgatcgctaaaaaccgcaagtcccgc
ggatccggtcccgcccgtggatctggatctggatccggatccggtccaatccgccgcaac
aaccctaatcggaaatcaaaccgatctgctccataccaatcggccgccaaggcgccggag
tccacctgggaacacgacatgtactcctccgaaggcttcccttcccgatcaacccgttct
tccgccggaatcgaaaccgggacgaagctctacatatccaacttggactacggtgtcatg
aacgatgatatcaaggaactgtttgctgaagtaggggagcttaaacgttacactgttcac
tttgacaggagtggaagatcaaagggaactgctgaagttgtatactctcggcgtggtgat
gcaatcgctgctgtgaagaagtacaacgacgttcagctcgacggaaagcccatgaagatt
gagattgtgggaaacaatcttcaagctgcttctgctccatctggtagacacgggaatgca
aacaacttcggtggtgcttcttcaaggcgtggaggacaagggagaggtggtcaacaacgt
cgtggtggtggtggtggtggtcaaggaggccgtggtggtggtcgtggcagacgctctggc
aagggcccaacagagaaggtatctgctgaagatcttgatgcggatcttgataagtaccac
gcaggagatatggagacaaactga
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integrated database retrieval system