Raphanus sativus (radish): 108833928
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Entry
108833928 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108833928
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108833928
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108833928
NCBI-ProteinID:
XP_018462818
UniProt:
A0A6J0LSI7
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Position
9:complement(32841649..32847621)
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AA seq
590 aa
AA seq
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MAASSSSAASFFGVQQDDQTHLLPPNSSAAAPPLPPHHQPPQSQQPLEAPPQKKKRNQPR
TPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNNSNNT
SSMILGLSHMGASQNLDHQSSDVLRLGSSGGGGAGASSRSSSDLIAANASGYFMQEQNPS
FHDQQDHQQQGFLAASNNIKPSPMNFQQSLMQFSHDNHNSPSSNLFNLSFLSGHNGVASA
TSNPNAAAVSSGNLMISNHFDSENAVGGGRGGGERSTGLFPNNLMTSADRISTGAVPSLF
SSSMQNPNSTTHMSATALLQKAAQIGSSSSNNSNSNNASSILRSFGSGMYGESETNLNDL
MNTFSNPGATGNNVNRVDSPFGSYGGVNKGLNADKQSMTRDFLGVGQIVRSMSGSGGFQQ
QKQQQRHGNSTEIVGSSTDSANINSINVNPGGGPASPPPFLTNTGWNPPC
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctgctgcttccttctttggagttcaacaagatgatcaaact
caccttcttcctcctaattcctccgcagccgctcctcctcttcctcctcaccaccagcca
ccacagtctcagcaaccccttgaggctccaccgcagaaaaagaagagaaaccaaccaaga
actccaaattccgatgcagaagtgatagctttatctccaaagacactaatggctacaaac
agattcatatgtgaagtatgcaacaaaggatttcaaagagaacagaacctacaacttcac
cgaagaggacacaatcttccatggaaacttaagcaaaaatcgaccaaagaagtgaagagg
aaagtgtatctttgtccggagcccacgtgcgtccaccatgatccgtcacgtgctctcgga
gatctcaccggaattaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgc
gagaaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgt
ggtaccaaagaatatcgttgcgactgtggtacacttttctctcggcgagacagtttcatt
acacacagagccttttgtgacgcgttggctcaggagagtgcgagacacccaacttctttg
acttctttgccaagtcaccactttccatacggacaaaacaccaacaactccaacaatact
tcaagcatgatccttggtttgtctcacatgggggcctcacagaatcttgatcatcagtcc
agcgatgttctccgactcggaagcagcggaggaggaggtgcaggagcttcctcacgctct
tcctccgatctcattgctgcaaatgcttcaggttacttcatgcaagagcaaaaccctagc
tttcatgatcaacaagaccatcaacaacaagggtttttagctgcaagcaacaacatcaag
ccatcaccaatgaattttcaacaaagtctgatgcagttctcacatgataaccataactct
ccttcctccaatctcttcaatctcagcttcctctctggacacaatggagttgcttctgct
acaagcaaccctaatgctgcagctgtttcatctggcaaccttatgatttctaaccatttt
gatagcgaaaatgctgttggaggcggaagaggaggaggagaaagaagtacaggtctcttc
cctaacaatctgatgacctcggcggacagaatcagcacaggagcagtgccttcactcttt
agctcatcaatgcaaaaccccaattcaacaactcacatgtcagccactgctcttcttcag
aaagctgctcaaattggttcaagctcgagcaacaacagcaatagtaataatgcttcatcg
attctaagaagctttgggagtggaatgtacggagaaagcgagactaatcttaacgatttg
atgaacactttctctaaccccggcgcaactggaaacaacgttaatagagtagattctccg
tttggttcatacggaggagtgaacaaaggattaaacgctgataaacaaagcatgactaga
gactttcttggggttggacaaatcgtaagaagcatgagtggaagcggagggtttcaacaa
caaaaacaacaacaacggcatgggaatagtacagaaatagttggctcttcgacggattcc
gccaatataaacagtattaatgtgaatcctggtggtggtccggcaagtccaccaccgttc
ctaaccaatactggatggaatccaccatgctag
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