Raphanus sativus (radish): 108834029
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Entry
108834029 CDS
T06014
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3 isoform X2
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108834029
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
108834029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
IBN_N
Motif
Other DBs
NCBI-GeneID:
108834029
NCBI-ProteinID:
XP_018462899
UniProt:
A0A6J0LRJ2
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MGAAEVFTDPSSLYDVGNNDSCDTETVQGVRNALASAQNGESDRFDQLVETIQINDRSDA
AAAAELNTLLKALSGSVACIDITHHQKLLSAIFGMSLWNQRPLIMDALVGLLISLAATSG
KYLDSCLHMLVRHFVPPPWVINRLSQSRVSTQKGEVLSRVHEALLKISLLVPLAPSRLFP
MLSQQMPKMNKKDQDQVVVTYVENLLKLESSSIGQVGGNMIFMMVMERLRDLDLEIDWDD
ILQDDSSRGMFDMELEDAMNEGDELPAGSVNQDTSSGKIAFESLDKLMVTSFDHLESCQD
AGRLDQVFEKLFESFENFILNTYKSKVSQFLMFYACSLDPENCGVKFGSKLLDIFLSSNK
PRPTRMSAVAYLASYLARGKFLPVSYVASMLKRLVDECADYCRICNDDIRPEAHQLFYSG
CQAIMYVLCFRMRSILDVPRFRSELIPLESILMHKLNPLMVCLPSVVAEFLKQAKAVGLF
VVSDSFIFDDLLESELSRAFGGRERLDTFFPFDPYLLKSSNSVISPNFIYWSTMMNQDDD
DDDDAEIIVNGDEESDEEEEEEGDLDYAMDKMSITPKHSFKNKMERDRLMKMPSMIRPST
SPQSL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagcagaggtttttactgatccgtcaagcttatatgatgtgggcaacaatgat
tcgtgtgacactgaaacggtgcagggcgtgagaaacgcccttgcatctgcccagaatggg
gaatcagaccgtttcgaccagcttgttgaaacaattcagatcaacgatagatctgatgct
gctgctgctgctgagcttaatacactcttgaaagctttatcaggctctgtggcttgcata
gatatcactcaccatcaaaagcttctctctgcgatatttggaatgtcattgtggaatcag
agacctcttatcatggatgcattggtgggcctactcatatcactggctgccaccagtgga
aagtatctggactcttgtctgcatatgctcgtaagacacttcgttccaccgccttgggta
atcaatagactttcacaaagccgtgtaagcacccagaagggagaagttctttctcgtgtt
catgaggctcttctgaagatctctcttttggttcctcttgctccctcgagactattcccc
atgctctcccagcagatgcccaaaatgaacaaaaaggaccaggaccaggtggtagtgact
tatgtggagaacttattgaagttggagagtagctcaatcggtcaagttggtggcaacatg
atctttatgatggtgatggagaggctacgagatttggatttggagattgattgggatgat
attctgcaagatgactctagtagaggcatgtttgatatggaacttgaagatgctatgaat
gaaggagacgagcttccagcggggtctgtaaatcaggatacatcaagtggaaagatagct
tttgagtcgttggacaaattgatggtcacatcttttgatcatcttgaatcctgtcaagat
gctggccgtttggatcaggtgtttgaaaagctcttcgagtcatttgagaacttcattctg
aatacctacaaatccaaagtctcccagtttctcatgttctatgcatgttcactggatcct
gaaaattgtggtgtgaaatttgggagtaagctgctggacatttttctctccagcaacaag
cctcgacctactaggatgagtgcggtggcttatctagctagctacttggctcgtggaaag
tttttacctgtttcctatgtggctagcatgttaaaaaggttagtagatgagtgtgcggat
tactgtaggatctgcaatgatgatataaggcctgaagcacatcagcttttctattcagga
tgtcaggcgatcatgtatgtgctgtgcttccgtatgagatccatcctagatgttcctcgc
tttcggtccgagcttataccattggagtcaattttaatgcacaaactaaacccattgatg
gtatgccttccatcggtagttgcagagttccttaaacaagctaaagcagttggtctgttc
gtcgtctcagactccttcattttcgatgacctgcttgagtctgagctttctcgtgcgttt
ggcgggcgtgagagacttgatacattcttcccctttgacccttacttgctgaaaagctct
aacagcgtcatctccccgaatttcatctactggtcaacgatgatgaaccaagatgacgat
gatgatgacgatgctgagataattgtgaatggggatgaggagagtgatgaagaagaggag
gaagaaggtgatcttgattacgcaatggacaagatgtccataacgcctaagcactctttc
aagaacaagatggaaagagacagacttatgaaaatgccttccatgatcagaccttctact
agtcctcaatccctttaa
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