Raphanus sativus (radish): 108834306
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Entry
108834306 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108834306
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108834306
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108834306
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108834306
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Atypical E3
108834306
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108834306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
DUF2321
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
108834306
NCBI-ProteinID:
XP_018463152
UniProt:
A0A6J0LT00
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All DBs
Position
2:complement(28443014..28444483)
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AA seq
247 aa
AA seq
DB search
MLKGTVFNVLHWLRWQELGLTKSSLMFVNTVSDDQSKLGTKYSVPQIAFFNGIIEAIAQD
EAAQGCISALRLTDLVLIFQLPSEASSSQQQVPPAFKNFSLSQKEKTLNALVKDKWLWCT
RDCNIGLGIRSLIDLRSWFRNNDVRSCEVCNEAGVKADLCPNEGCTVRIRKYCLKSLLSQ
RDDKVCSGCGKPWPLGRVTREEAVEAAVNDGEEETDTEATVLRSKKRKNRSQRDSAENVC
QSPASFN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaggaactgttttcaatgttcttcattggcttcgttggcaggagctgggatta
acaaagagctctcttatgtttgttaacactgtctccgatgatcaatccaaactcgggact
aagtattctgttccgcagattgcattctttaacggcattatagaagcaattgcacaggat
gaagctgcccaaggttgcatatcagcattacggttgacagatcttgtgttgatatttcag
ttaccaagtgaagccagcagcagtcaacagcaagtccctcctgcattcaagaacttttca
ttgtcgcaaaaggaaaaaactctcaatgcacttgtgaaggacaaatggctgtggtgcaca
agagactgtaacattggacttggtataagatctcttattgacctgcgcagttggttcagg
aacaatgatgttagatcttgtgaggtttgcaatgaagctggagtaaaggcggatttgtgt
ccaaatgaaggttgtacggtccggatacgcaagtactgcctcaaaagcttgttgtctcaa
agggatgataaagtttgttctggatgcgggaagccatggcctttgggtagagttacaaga
gaagaagctgttgaagcagcagtgaatgatggtgaggaggaaacagatactgaagccaca
gttctgagatccaagaaaaggaaaaataggagccaaagagactcggctgaaaacgtctgc
caaagtcctgccagttttaattaa
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