Raphanus sativus (radish): 108834336
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Entry
108834336 CDS
T06014
Name
(RefSeq) anaphase-promoting complex subunit 1
KO
K03348
anaphase-promoting complex subunit 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108834336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108834336
03036 Chromosome and associated proteins [BR:
rsz03036
]
108834336
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
108834336
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108834336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
108834336
NCBI-ProteinID:
XP_056861501
UniProt:
A0A9W3DCF1
LinkDB
All DBs
Position
3:complement(27535200..27546938)
Genome browser
AA seq
1817 aa
AA seq
DB search
MSPGVRRLTVLGKFKPFGLIAEATDAKPSDVDVDDSYEYFLFDPHLTGQLDDDDDDGSEA
NFSRQREHELFIRHNHIIWTSGSRVLKRFTLSSPIIKACWSHLGRGPEAFLCVLQIGCLT
VYSTSGEVVSVPLSRTVISIWPLPFGLLLQQAAQVNQSSHIPFSSATPTLGSRERLLQRK
EIGNVSPQNFHSSVAHDLTSRRDMSSHLILRDPLEEPEPIYLEERGKLNIMKDYDERTIW
TSDRLPLMTSYNKGKMQHSVWAAEYIESNREASASCSSGVVPDTVFPKRVSFRRIWQAKG
AKKAASKVFLATDDAVPVICFLILEQKKLLSVGLQTVEINNDILFDVKPDISWSVSAIAA
APVVVTRSQVKNGLLPHLDIIVLSPENDLVLYSGKQCLCKYVLPSGCGKNLVSGDRESAE
KVSGSRDLKITGLSDAVLGCINLSVNHSQIYRCALAGSPSSSLANDCIAALAEGLRSDLY
NLFLSLLWGDDNSDQKGSCVHFEWEAFCNIFLGICQNPTDVHLKQPKTSSESSWEFLLNS
NFHKTYSRFHGGISSNNSLDLEGIVPFETKTGGGKKPNNSFELMVKSLDCLHAVYESLKM
DNLRKQDLHQLAVLLCNIAKFLGEKCYIDHYIRDFPRLSETIRACTTLSSCRKPPNLFRW
FENCLRGGSLPTNLDDIPDLIRKDSCSIVSWARKIVSFYSVLFGDKPVGQKLSSGVPCNI
APGSYSSNEELAILAMAGERFGLRQLDLLPSGVSLPLRHALDSCRESPPADWPAIAYVLL
GREDMALSVFRNLSSSKEFEMQSNKSLISMSIPYMLHLHPVIVPSSLSESVGMENTKIED
TSSVDGSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVIQTSANPTISDQEQQQ
DQLWRIAQRTAVLPLGRGAFTLSTIHTLLTEAFTVPKLVFAGRLPAQQNAIVNLDPNVRN
IQELKTWPEFHNAVAAGLRLAPLQGKVSRTWIKYNKPGEPNAVHAGLLFGLGLQGYLHVL
NLSDIYQYFTQDHESTTVGLMLGLAASYRRSMQPEIAKALFFHVPARYQASYAEFEIPTL
LQSAALVSVGILFEGSAHQQTMQLLLGEIGRRSAGDNVLEREGYAVSAGFSLGLVALGRG
GDALGSLDSFVNRLLQYLGAKEGRSLLAPSNEDHRSAAQITDGSASNVDITAPGAIIALA
LMYLKTESEVIFSKLSIPQTHYELQCVRPDFIMLRVIARNLIMWSRIRPTCDWIQSQVPE
VVKNGISHLQDDMDDMYEIDVEALVQAYVNIVTGACISLGLRFAGTRDGNARDLLYNYAL
YLLNEIKPVSSTSGTAFPRGISKFVDRGTLEMCLYLVILSLSVVMAGSGDLQIFRLLRFL
RSRNSADGHANYGTQTAVSLATGFLFLGGGMRTFSTSNGSIAMLLITLYPRLPSGPNDNR
CHLQAFRHLYVLATEARWLQTIDVDSGLPVYAPLEVTVKETELYSETRYCEVTPCILPER
AILKRICVCGPRYWPQQVELVPEEKHWWSFGDKSDPFSSGVIYVKRKVGACSYVDDPVGC
QSLLSRAMHKVFGLRTLDESNTLASSHKELDSDSVDHLVSTFSSDPSLIAFAQLCCDKSW
NDRSDSDFKEFCLQVLFDCISKDRPALLQVYLSLYKTIGSMADLLVKNDSNVCDSLSISS
LKVSLAYNEAVTSGRLASSGGFVQSIFLASLGKRCEEILNCSTELKIHLRNYLISETWHA
VHNSEMQKDVILLSWYLKWFSVPSPSIIKAAVDKIKPKFKVSTSAVPLLRLLLPSTHISA
ISEIDRVFFPSNVTIAL
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgggggttcgacgacttactgtcctcggaaagttcaaacctttcggtctaatc
gctgaagctaccgacgctaaaccttcggatgttgatgttgacgattcctacgagtatttt
ctgttcgatcctcatctcactggccagctagacgatgatgatgatgatggaagtgaagct
aacttctcccggcagagagagcatgagctcttcatccgacacaaccacataatctggaca
agcggttcacgcgtgctcaagcgctttaccttgtcttctcccatcattaaggcatgctgg
agtcacctgggtcgaggaccagaagctttcctttgtgtcttacaaattggctgtttaaca
gtatacagcacgtcaggcgaagttgtatctgttccactttcacgtactgtcatatcaata
tggcctctaccgtttggtctacttcttcagcaagctgctcaagtgaatcaatcctcacat
attccattttcttctgctacccccactcttggttcccgtgagaggctgctccaaagaaaa
gaaattgggaatgtttcaccacagaatttccattcctcggttgcgcatgatcttactagc
agaagagacatgtcttcccatctgattctaagagatccgttagaggaacctgagccaatc
tatctagaagagaggggaaagttgaacataatgaaggactatgatgagagaacaatttgg
acaagtgaccggcttcctcttatgacctcatataacaaaggcaagatgcaacattctgtg
tgggcagccgaatatatagagtctaaccgtgaagcttctgcttcatgttcaagcggcgtg
gttcctgatactgttttcccgaagcgagtatcttttcgcagaatatggcaagccaaaggt
gctaagaaagctgcatctaaggtctttttggcaactgatgatgcagtcccagtaatttgc
tttctgattctagaacaaaagaagctgttatcggtgggactccaaactgtagagatcaat
aatgatattctgtttgacgttaagcctgatataagctggagtgtctctgcaattgctgcc
gcacctgttgttgtgacacgctctcaagtgaaaaacggactccttccacatttggatatc
atcgttttatctccagaaaatgacctcgttctttattcaggaaaacaatgtctctgtaaa
tatgtactgccatctgggtgtggaaaaaatctcgtttctggtgatagagagtctgcagaa
aaagtttcaggttcccgggatctgaagatcactggattatctgatgctgtgttaggatgt
atcaatttatcggtaaatcattcacagatctatcggtgtgccttagctggtagcccttca
tcttcacttgcaaatgattgcatagcagccttagctgagggattacgatcggatttgtac
aatttatttctctctcttctttggggagatgataattctgatcagaaaggttcttgtgtt
cattttgaatgggaagcgttttgcaacatttttctggggatctgtcagaaccctactgat
gtacatctgaagcaaccaaaaacatcatcagaatcctcctgggagttccttctcaacagc
aattttcataagacatactccaggtttcacggtggcatcagttcaaacaattctttggat
ctggaaggaattgtcccatttgaaaccaagactggtggtggaaaaaaaccaaacaactca
tttgaattgatggtcaagagtttagattgtcttcatgcagtatatgagagtttgaagatg
gataatctacggaaacaggatttgcatcagctagctgttttattgtgcaatattgccaag
tttctgggtgagaagtgttacatagatcactacatacgtgattttcctcgtctttccgaa
actatccgggcatgcacaaccctttcttcctgcagaaaacctccaaatctgttcagatgg
tttgagaactgtttaagaggtggatctttacccacaaaccttgatgacatcccagatttg
atccgtaaagatagttgctccattgtgagctgggcaaggaaaattgtttccttctacagt
gtgttatttggtgataagccagtaggacagaaactttcttcaggtgtcccctgtaatatt
gccccaggatcatattccagtaacgaggaacttgctatcttagctatggctggagagaga
tttgggcttcgtcaactggatttgctaccttctggtgtatctctcccgctgagacatgct
ctggatagctgtcgagaatctcctccagctgactggccagcaattgcctatgtgcttctt
ggtcgagaagatatggccctatccgtcttcagaaatttgagctcatctaaggaatttgag
atgcagtcaaataagagtttaatatccatgtccataccatacatgctgcacttgcatcca
gtaattgttccatcctctttatccgagtcagttggcatggaaaacactaagattgaggat
acaagttccgtggatggttctgtgatagatggaatggagcatatcttcaactcctatacg
cagttacggtatggtcgagatctacggctgaatgaggttcgacgtcttttgtgctctgca
cgacctgtggtaattcaaacgtctgccaatcctactatatctgatcaggagcagcaacag
gaccagctatggcgcatagcacagaggactgctgtgcttcccctggggcgtggagcattc
acattatctacaatacacactcttttaactgaggcgtttactgtaccaaaacttgttttc
gctggtcggctgcctgcccaacaaaatgccattgttaatctagatccaaacgtaaggaat
atccaagaactaaagacatggccagagtttcataatgctgttgctgctgggttacgactg
gctccgcttcagggaaaggtctccagaacgtggattaaatacaataaaccaggagagcca
aatgctgttcatgctggacttctgtttgggctggggttacagggatatctgcatgtgtta
aaccttagtgacatataccaatatttcactcaggaccatgagagcaccacggtaggtttg
atgctcggtctggcggcttcttataggagatcaatgcaacctgaaatagcaaaggctctc
tttttccatgttcccgcgcgataccaagcatcatatgctgagtttgagataccaacactt
ctgcagtctgcagcgttagtctctgttggcattttatttgaaggatcagcacaccagcag
acaatgcaattacttctgggtgaaattggccgccgaagtgcaggggacaatgttcttgaa
agggagggttatgctgtatctgcaggattctcacttggtcttgttgctttgggccgtgga
ggggatgcgctcggttcgctggactcctttgtcaatcgcttacttcagtatttaggagca
aaagagggaagatctctccttgcaccatcaaatgaagatcaccgaagtgctgcacagata
acagacggaagcgcttccaatgttgatataactgcacctggagcgattatcgctctcgcg
ttaatgtatcttaagacagaatcagaggtcattttctcaaagctttctattccacaaaca
cattacgagttgcagtgcgtaaggcctgatttcataatgctccgtgtcattgctcgaaac
ttgataatgtggagcaggatccgtcctacatgtgattggattcagtctcaagttcctgaa
gttgtcaaaaatggtatcagccacctccaagatgacatggatgatatgtatgagatagat
gttgaagcccttgtgcaggcatatgtgaatatagtgaccggggcctgcatttcacttggg
ctaagatttgctggtacaagggatggaaatgctcgtgacttgctttacaattacgctctc
tatctcctgaatgagatcaagcctgtttcttctacatctggaactgcatttccgagggga
atatctaaatttgttgatcggggaacgcttgaaatgtgtctttatcttgtcattctttca
ctttcagtggtcatggcgggatcaggggacttgcaaatatttcggttgttgaggtttctc
cgcagccgaaactctgctgatggacatgctaactatggcactcaaacggcggtgagctta
gccacgggtttcttatttcttggaggtggtatgcgaacattttcaacgagtaatggctca
attgcaatgttgctcatcactctctatccacggttgccttctggaccaaatgacaatcgc
tgtcacctccaggcattcaggcatttatatgtccttgcaacagaggctcgttggctacag
actattgatgttgattctggtctgcctgtatatgcccctctagaagtcacagtaaaagag
acggaactttattcagaaacaagatattgcgaggttaccccgtgcattctgccagagcgt
gctattctaaagagaatttgtgtatgtggtccccgatactggccccaacaagttgagctt
gtcccagaagagaaacattggtggagctttggggacaagagtgatcccttcagttcaggt
gttatatatgtcaaaaggaaagtaggagcttgttcgtatgtagatgatccagttgggtgt
cagtcactgctttcacgagcaatgcataaggtttttggtttaagaactctagacgaatct
aacacgcttgctagtagtcacaaagaactggattctgatagcgttgatcacttggtcagc
actttctcatctgatccaagcctaattgcctttgcacagttgtgttgtgacaaatcttgg
aatgacagatctgattctgatttcaaggagttctgtctgcaagtgttgtttgattgtata
agcaaggatagaccagctcttttgcaggtttatttatctttgtacaaaactattggttca
atggctgatctgctagtcaaaaacgatagtaatgtgtgtgattcactttccatctcaagc
ctcaaggtttctcttgcttacaacgaggcggtaactagtggaagattggcctcttcaggt
ggctttgttcaatcaatcttcttagcatcattggggaaacggtgcgaagagattctgaat
tgctcaaccgagctgaagattcatttgaggaactatctgatctcggagacttggcatgct
gttcataactctgagatgcagaaagatgtaatccttctctcatggtatttaaaatggttc
agcgtaccgtctccatcgatcatcaaagcagcagtggacaagatcaaacctaagttcaag
gtctcaacttcggcagtacctttgttacgattgttgttaccaagtacgcatattagtgcc
attagtgagattgatagggtctttttcccatcaaatgtgacaattgcattgtga
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integrated database retrieval system
