Raphanus sativus (radish): 108834501
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Entry
108834501 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108834501
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108834501
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108834501
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108834501
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108834501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
108834501
NCBI-ProteinID:
XP_056848795
UniProt:
A0A9W3CBA1
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All DBs
Position
8:complement(8261042..8263284)
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AA seq
246 aa
AA seq
DB search
MLQNTVTVKLTMVTRSPAKKQLRSEIENTGTTLFVTGLSTKVTDKDLEAHFSKQGKVASC
VLKLDPHTRVSRGYAFVTMDSLRDAERCIKYLNQTLLDGRYIKVEKSRRKRPRTPTPGQY
LGLKSSRDNEKDRDGRSSRGNHDDRDDSRQRLSPKRHYSPRGERNSPRRDHSPRDGRESP
RHDRSPRGERSPERRGSRSPPAQPRPRTLARPISPASRIRAEIDASVWADLHLSPIVADK
DLEWTP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaacacagtgactgtgaaacttacaatggtcacacgatctcctgcaaagaaa
caactcaggtctgaaattgaaaacactggtaccactctcttcgtgaccggcctatccaca
aaagtcactgacaaggatcttgaagcacatttctccaagcaaggaaaggttgcgtcatgc
gttctaaagctggacccgcacacccgtgtgtctcgtggttatgcctttgttacaatggat
agtcttagagatgctgagcggtgcattaagtatctcaaccaaactttacttgatggcaga
tacataaaagtcgaaaagtcccgaagaaagcgtccgagaactcccaccccaggccaatat
cttggcttgaaaagctctagagacaatgaaaaagacagagatggccgtagcagtcgaggg
aatcacgatgatcgtgatgattctcggcaacgtttgtcaccaaaacgccactattcacct
cgtggtgaaaggaactcaccaagacgcgaccattcacctcgtgatgggagggagtcacca
agacacgatcgttcacctcgtggtgaaagaagcccagagagaaggggctcacgatctcct
cctgcacagccgaggccaagaactttggcaaggcctatatctccagcaagccgtataagg
gctgaaatagatgcaagtgtctgggccgacctacacctatccccaattgtcgcggacaag
gatcttgagtggacaccgtag
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