Raphanus sativus (radish): 108834831
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Entry
108834831 CDS
T06014
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108834831
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108834831
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
108834831
NCBI-ProteinID:
XP_056866557
UniProt:
A0A9W3DS06
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Position
5:518439..521398
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AA seq
399 aa
AA seq
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MSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE
LNQAISMVSYYASSSEPAQIRGKTIYIQYSNRHEIVNNQSPGEVPGNVLLVTFEGVESHH
LSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPKYLLPEH
VASCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPSLGADGKKVETQSN
VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIATAAIAKEALE
GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVGQKVPGVAEASAPTTGG
WQNGQVQTQYAGYGGSPYMYPSADPTGASPSSGHPPYYG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacagttccggtacacgcagacgccgtcgaaggtggtgcacctgcggaat
ctaccgtgggaatgcgtggaagaagagctcatcgacctgtgcaaacgattcggaaagatc
gtcaatacgaagaccaatgtcggcgccaatcgcaaccaagccttcgttgaattcgctgag
ttgaatcaggcgatatcaatggtgtcgtattatgcttcatcttcggagccggcacagatt
cgtgggaaaactatttatatacagtactctaatcggcatgagattgtgaacaatcagagt
cctggtgaagtccctggaaacgtcctcttggttacctttgaaggagtcgaatctcaccat
ctcagcatcgatgtcatccatctggtgttttctgcttttggattcgtgcacaaaattgcc
acttttgagaaagctgctggtttccaggcactagttcagtttactgatgtggaaactgct
tcagcggcaaggagtgcgctagatggtagaagtatacccaaatatctgcttccagaacat
gttgcctcttgcaatttgcgaatgtcttattcagctcatactgatctaaacatcaagttt
cagtcccaccgtagcagggattacacgaatccataccttccagtgaatcataccgcaatg
gacgggtctatgcagccttctttgggtgctgatgggaagaaggtagaaactcagagcaat
gtcctgcttgctttgattgagaacatgcagtatgctgtcaccgtggatgttcttcacacg
gtcttttccgcgtatggaactgtccagaagattgctatatttgagaagaatggttcaaca
caagccttaattcaatactcggatatagcaacggcggcaatagcgaaagaagcactggaa
ggacactgcatatatgacggtggctactgtaagcttcgactatcatactctcgtcatact
gatctcaatgtaaaggcatttagcgacaaaagcagagactacacactacctgatctgagc
ctactcgtgggccaaaaagttcccggagtggctgaagcttctgcgccaacaacagggggt
tggcagaatgggcaggtgcaaacacaatacgcaggttatggtggaagtccatatatgtac
ccatcagctgatcccacaggggcttcaccttcttctggtcatcctccttactatggttga
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