Raphanus sativus (radish): 108835084
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Entry
108835084 CDS
T06014
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108835084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108835084
Transporters [BR:
rsz02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108835084
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Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108835084
NCBI-ProteinID:
XP_018463891
UniProt:
A0A6J0LX06
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Position
4:12459171..12461336
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AA seq
405 aa
AA seq
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MEEDNHQKQLDDAGSSCLFKTCFNALNALSGIGILSVPYSLARGGWLSLSLLLLLAATAF
YTSLLITKCMNADRTIKTYPDIGERAFGRPGRIIVSVFMHLELYLVTTGFLILEGDNLHN
LFPGFNIKLMGLRLNGKQSFMASVALVIMPTLWWDSLSVLSYVSMSGVLATAVTLGSISW
VGAFDGIGFHQSGKLINWSGIPTALSLYAFCYGAHPVLPTLYSSMKSKHQFNNVLLISFI
LCTIGYTSMAVLGYLMYGSNTLSQITLNLPVHKTSSKVAIYTTLVNPIAKYALMITPTVN
TIKDWFPKQYARKSYLHLLISTMFITSSVVIAETLPFFGYMMSLVGALLSVTVSILLPCL
CYLKISGNFKKLGFETVMLFGMVAMSVPIGVLGTYIAIREMVGSV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagataaccaccaaaaacaacttgacgatgccggatcttcatgtctctttaag
acttgcttcaacgcactcaatgctctttcaggaattggaatactatcagtaccatattca
ctagctcgtggaggatggttgagtctttcacttctgttactcctagccgcaaccgccttt
tatacatctttactcattacaaaatgtatgaacgcggaccgcaccatcaaaacgtatcca
gacattggagaacgcgcgtttggtagacctggaagaatcattgtgtcagtcttcatgcac
ctagaactatatctagtcaccacaggtttcttgatccttgaaggcgacaatcttcacaat
cttttcccggggtttaacatcaaactgatgggtttgaggttgaacgggaaacaatcgttc
atggcgtcagtggcactcgtcatcatgccaactctgtggtgggacagtctaagcgtcttg
tcttatgtttccatgagtggagttttagctacggcagtgactcttggatcaatatcttgg
gttggagcatttgatggaatcgggtttcatcaaagtggaaagttaatcaactggagtggg
atccctactgctttgagcttgtatgctttttgctatggtgcgcatccagtgttgccgact
ttgtattcttctatgaaaagcaaacatcagttcaacaatgtcctactaatatcttttata
ctatgcaccataggttacacatcaatggcggttttgggctacttaatgtatggatctaac
actttatcgcagataacgttgaatcttccagttcataagacgagttcaaaggtggctata
tacacaacccttgtgaaccccatagccaaatatgcattgatgatcacaccaacggtgaac
accataaaagattggtttcctaagcagtacgccaggaaatcatacttgcatctcttgata
agtacaatgttcataacaagtagtgtggtcatcgccgagacacttcctttcttcggctat
atgatgtctctggttggtgcattacttagcgtgacggtatctattcttctcccttgccta
tgttacttgaagatctctggaaatttcaagaaacttgggtttgagactgtaatgttgttt
ggtatggtggcgatgagtgttcccattggtgttttaggaacttacatcgcaattcgagaa
atggttggtagtgtttga
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