Raphanus sativus (radish): 108835093
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Entry
108835093 CDS
T06014
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108835093
03009 Ribosome biogenesis [BR:
rsz03009
]
108835093
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108835093
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
RNase
108835093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
108835093
NCBI-ProteinID:
XP_018463898
UniProt:
A0A6J0LVN7
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Position
4:complement(2434801..2437505)
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AA seq
415 aa
AA seq
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MKIAIEGCMHGDLENVYKTIQHHEQIHNTKVDLLLCCGDFQAVRNEKDMDSLSVPIKYRE
MKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAATNIYFLGYAGVVKFGNLRI
GGLSGIYKGRDYRLGHFERPPYNNSTIKSVYHVREYDVHKLMQLEEPLDIFLSHDWPVGI
TDYGDSRTLIQQKPYFQEEIEAKTLGSKPAAQLLEKLKPRYWFSAHLHCKFAASVQHGND
GSVTKFLALDKCGPGKKFLQIIDIESEPGPFEVLYDEEWLAITRKFNSVFPLTQRPASFS
SADMDMQESREWVRKKLEERQFKPFEFVKTAPAYNPSQRIFDPIPEIPQNPQTLSLLELL
GLPYLLDSPPVTGERTTIPASPARTDFQTYSEEIPIDDIDEVEDIPEAKGDNLPH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgctattgaagggtgtatgcacggagaccttgaaaatgtgtacaagaccatt
caacatcacgaacagattcacaacactaaagtcgatctcctcctctgctgcggcgatttc
caggctgtgagaaatgagaaagacatggatagccttagcgtacctataaaatacagagag
atgaagtccttctggaagtactactccggccaagaagttgcccctgttcccactatcttc
atcggtgggaatcacgaggcttccaactacttgtgggaactgtattatgggggttgggct
gccaccaacatctactttctaggttatgcaggggttgtcaagtttggtaatctccgaatt
ggaggcctttctggtatttacaaggggagagattaccgtttaggacactttgagcggccg
ccatataacaatagcacaatcaaatcggtgtatcatgttcgtgagtatgatgtccataag
ctgatgcaactcgaagagccgcttgatatattcctctcacacgactggcctgttggaatc
actgattatggagactcgagaacgcttattcagcagaaaccatacttccaggaagagatc
gaggcgaaaactcttggaagcaaaccagcggctcaactgctagagaaactgaagcctcgg
tattggttttcagctcacttacactgcaaattcgctgcttctgttcaacatggcaacgat
ggctcagtgacaaagtttcttgccttggataaatgcggtccagggaaaaagtttcttcag
atcattgatatagaatcagagcctggaccttttgaagttctatacgatgaagagtggcta
gcaataacacgaaagttcaattctgttttcccgctaacacagagaccagcgagtttcagc
tctgctgacatggatatgcaagagagccgagagtgggtgaggaagaagctagaagaaagg
caatttaaacctttcgagtttgtaaagacggcccctgcatataacccttcacagcgtatc
tttgatcccatacctgagatcccgcagaatcctcagacactgtctttgttagagctcctt
ggtcttccatatctccttgattcaccaccagtaacaggtgaaagaaccaccatccctgct
tcaccggctcgaacagattttcaaacttatagtgaagaaatccctattgatgatattgat
gaagttgaagatataccagaagcgaaaggagataacttaccacactaa
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