Raphanus sativus (radish): 108835278
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Entry
108835278 CDS
T06014
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108835278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108835278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108835278
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108835278
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108835278
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108835278
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_5
Ank_4
PH
BAR
Ank_3
ANK_LRRK2
PH_11
BAR_2
PH_20
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
108835278
NCBI-ProteinID:
XP_018464055
UniProt:
A0A6J0LV35
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Position
3:25901786..25907515
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AA seq
830 aa
AA seq
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MHFSKLDDSPMFRKQLQSVEESAEILRERSLKFYKGCRKYTEGLGEAYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHILNDRLLQFANMDLHEVKE
ARKRFDKTSLTYDQAREKFLSLRKGTRSDVAAALEQELHTSRSMFEQARFNLVTTLSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNEK
MQEYKRQVDRESRFGSNGSNGSPNGDGIQAIGRSSHKMIDAVMQSAARGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGASSQLSGQRNSSELGSGLLSRWLSS
NNHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAESALDQMDWI
EKITGVIASLLSSQVPERCLPGSPMGSGHHRSASESSSYESSEYDIPNTDEFVCERSFLG
YNERPSRNIQPQRSIRKGEKPIDVLRKVFGNDKCADCGAPEPDWASLNLGVLVCIECSGV
HRNLGVHISKVRSLTLDVKVWEPSVITLFQALGNTFANTVWEELLHSRSAFHVEPGLTGS
DKSRVMVTGKPSYADMISIKEKYIQAKYAEKLFVRRSRDFDFPQTVAQQMWDAVSGNDKK
AVYRLIVNGEADVNSVYDDQSSSSSSLTLSRVMLIPEKPPTREEVLLRLRNELLDRTSSG
CSSSIPPEETGGCSLLHCACEKADIGMVELLLQYGANVNAKDSSGQTPLHYCILRGKAVV
ARLLLTRGADPEAVNREGKTALDIAAESKFTDSEVLALLTEAANSYNHRQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcagcaagcttgatgactctcccatgttccgcaaacagttacaaagcgtggag
gagagtgcagaaatattgagggaaagaagtctcaagttttacaaaggatgccgtaaatac
accgaagggttaggcgaggcgtatgatggagacattgcttttgctagtgcacttgagaca
tttggtggaggccataacgatcctattagtgtggcctttggaggacctgtaatgacgaaa
tttacaattgcgttgagggagattgggacttataaggaagttcttcgctcacaggtggaa
catatactgaatgatagattacttcaatttgccaatatggacttgcatgaggttaaggaa
gctcggaagcgctttgacaagactagccttacctatgatcaggcccgtgagaagtttctt
tcgttgaggaaaggtacaagaagtgacgttgctgctgctttagaacaggaacttcacact
tcgaggtctatgtttgagcaagctcggttcaaccttgtgactactctttcaaatgttgaa
gctaagaaaaggtttgaattcttggaagcagtcagcggaactatggatgcacaccttcgg
tacttcaaacagggttacgaattactgcatcagatggaaccatatatcaatcaggtcttg
acctatgcacaacagtccagagagagatcaaactatgaacaagcagcacttaatgaaaag
atgcaggagtataaaagacaggttgatagagagagcaggtttggttcaaacggttctaat
ggatccccaaatggagatggcatacaagcgattggtagaagctctcacaaaatgatagac
gctgtaatgcaatctgctgcaaggggaaaggtgcaaacaattcggcaaggttatctctct
aaacggtcttcaaacctgagaggagactggaaaagacggttttttgttcttgacagccga
ggaatgctgtattattacagaaagcaatgtagcaaaccatctggtgctagcagccagctc
tctggacagagaaacagctcagagcttgggtctggacttcttagtaggtggctttcttcg
aataatcatggtggagtacatgatgagaagtctgtagctcgtcatacagtgaacttgctt
acttcaactatcaaagtcgacgctgatcagtcagatctgaggttttgctttaggatcatt
tcaccttcaaaaaactacacattgcaggctgagagtgcactagatcaaatggattggata
gaaaagatcactggggttattgcatcactacttagctctcaggtccctgaacggtgtctt
cctggtagtcccatgggaagtggtcaccatcggtccgccagtgaaagtagctcatatgaa
agttctgaatatgacattcctaacactgatgagtttgtatgtgagaggagctttcttggg
tacaatgaaagaccatcaagaaacatccagccgcaacggtccattagaaagggtgagaag
cccattgacgttctgcggaaagtctttgggaatgacaaatgtgcagattgtggagctcca
gaaccagactgggcttctttaaatctaggggttcttgtctgtattgagtgttctggtgtt
caccgaaatcttggtgtgcatatatctaaggttaggtcacttacgcttgatgtgaaagta
tgggagccttctgttataactttgttccaagctcttgggaatacatttgcaaacacagtg
tgggaggaactgcttcattcaaggagcgccttccacgttgaaccaggcttaacagggtct
gataaatcaagggtcatggtcactggaaaaccaagctatgctgatatgatatctattaag
gagaagtatatacaagctaagtatgctgagaagctatttgttcggagatcaagagacttt
gatttcccacaaaccgttgcacaacagatgtgggatgcagtgagtggtaacgataagaag
gcagtttacaggcttattgtcaacggtgaagcggatgtgaactctgtgtatgatgaccaa
tcatcttccagctcttcgttaacactctcaagagtaatgttaataccagagaagccacca
acgcgtgaggaagtgctactcagattaagaaatgagttactcgatagaacctcctcaggc
tgttcttcaagtatacctcctgaggaaactggaggttgctctctgcttcactgtgcctgt
gagaaggcagacattgggatggtggagcttttgcttcagtacggtgcaaatgtaaacgct
aaagattcaagtggtcaaacgccgctgcactattgtattctcagaggcaaagcggtagta
gcaagactgcttctcacgaggggagcagacccggaagccgttaatagggaaggcaaaacc
gctcttgacattgctgcagagtcgaaatttactgattcagaagtcttggctctccttaca
gaagctgcaaacagttacaaccacagacagtga
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