KEGG   Raphanus sativus (radish): 108835625
Entry
108835625         CDS       T06014                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108835625
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108835625
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108835625
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108835625
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 108835625
NCBI-ProteinID: XP_056859016
UniProt: A0A9W3D5J1
LinkDB
Position
2:complement(30223940..30229416)
AA seq 1119 aa
MGSLNNLTEHLETYVDVSRSPTHHAESLKAIAASLEKGVLSLNQLVVEMDMYLTTTDDVV
RARGILLLAEILNHLKSKPLDNAVVHSLIAFFTSKLVIWRSLRGALTGCLALIKRKGVAG
VVTATDAEAVAKSMAQNVQVQSFALHDRKLCFELWECLVEQYPEAMINLGNLIVFATCEA
IDGEKDPPCLMVAFHVVELLARLFPSPSGPVASEASDLFEFISCYFPLHYTHTKGDEASI
PREDLSRGLSLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCAVKYGVNRMKK
HYEGLWSALKDALYSSPGRDLSFGLEFLTSPGFEMDEIHREAADLLQRLVKQDISFLGLV
VDDIRVNMVFDTISRYSRYEEMPDTSKLEVLVVSQILSVSARASVDSCNIIFQTFFFRLM
NTLGIVEETSTGDLVHKENSTVSTRLYHGGLHLCIELLTASKDLIPSSKESSSTPGSAQQ
SWSSIVNRFSVSLIGAFTSALQSSNDDCSADAYLGVKGLLAMGMFRGGSSPISRSEFEKI
LTTLTSIITAKSAKTVKWELALKALVCTGSFIDQYHESEKALSYMGIVVENLVSLVRSSQ
CSLPYPLILEATSEVCSTRPKYVEKMVEGFEEAFCSSFSDFYVNGNFKSIENCSHLLECV
TNKLLPRVTEIDGLEKSLVHFAISMWNQIESSVVFSYDFNGREFVEAAMKTMGQIVGVAL
VDSQNSIIQKAYNVISSSTLPAMESIPLTFAALEGLQRDLSTRDELTLSLFASVIIGASP
KASIPDVKPLIKLLMVSLLKGYIPAAQALGSMVNKLGTGSGGTCSLEEACDIIFYESFAS
GNDISSDDSSKSKCGSETLLSKICLGFYGSLDLQTRAITGLAWIGKGLLMRGDGRVNEIA
LVLMECLKSTSGSGNALHPSAMKHAADAFLILMSDSGECLNRKFHAVIRPLYKQRFFSIT
VPILESLIVNSQTPLSRTMLHVALAHIVSNVPVTVILDNTKKLLPVILEGLSVLSVDAVD
KETLFSLLLVLSGTLTDIKGKQSVSDNAHRIIECLVKLTSYPHLMVVRETAIQCLATLLE
LPHGRIYPFRREVLQAVTKALDDPKRRVREEAIKCRQAW
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgggatcactgaataatctcactgagcatctcgaaacttacgttgacgtctctcgttct
cctactcaccatgctgagagtttgaaagcgattgctgcttccttggagaagggtgtcttg
tctttaaaccaattggtggtggagatggacatgtatttgaccaccactgatgatgttgtc
cgagcacgaggtattctcctgcttgcagagatcctgaaccatctaaagtcaaagcctttg
gacaatgcagttgtccacagtctcattgctttctttacatcaaagctggtgatttggaga
tcgttgcggggtgcgcttactggttgcttggctctgattaagaggaaaggcgtagctggt
gtggtcactgctactgatgcagaagctgtggcgaagtcaatggcacagaatgttcaagtt
cagtctttcgcactgcatgatcgcaagctctgttttgaactatgggagtgccttgtagag
caataccctgaagctatgatcaatttgggcaatttgattgtttttgctacatgcgaagcc
atcgatggagaaaaagatcctccatgcttaatggtagcttttcatgtagtagagcttttg
gctcgattgtttcccagtccctccggtccagttgcctccgaggcatctgatctttttgag
tttataagttgctacttcccacttcattatacccatacaaaaggtgatgaagctagtatt
ccaagagaagacctctcaaggggactatctctagcaatctcctcgacgcctttttttgaa
ccgtatgctattccattacttcttgaaaagctctcatcttctctacccgtcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctgtgaaatatggagtaaaccgaatgaagaag
cactatgaaggcctttggtccgctttaaaagatgcactttactcttctcctgggagagat
ttgtcctttggtctagaattcctcactagtccagggtttgaaatggatgagatccacaga
gaagctgctgatcttcttcagaggcttgttaagcaagatatctcgtttttaggtttagtt
gttgatgatatacgtgtcaacatggtctttgataccatttctagatactcgcgctatgaa
gaaatgcctgacacgagcaaactggaggttcttgttgtcagtcagatactgtccgtgtct
gccagagcttctgttgactcatgcaatataatctttcaaacctttttcttccgccttatg
aatactctagggattgtagaggaaacgtcaactggtgatcttgttcacaaggaaaactcg
acagtttctactagactctaccatggaggtcttcatctttgcattgaacttcttacagca
tcaaaagatctcattccaagttccaaggaatcttcttcaacgcctggatccgcgcagcaa
tcttggtcctctatagttaacaggttctcagtttcactgattggagcattcacttctgca
ttacaaagctctaatgatgattgtagtgcagatgcatatcttggagttaagggtttgctg
gccatgggtatgttccggggcggctcttctcctatatcaagatctgaattcgagaagatt
ttgacgaccttaacatcaatcatcacagccaagagtgccaaaacagtgaagtgggaactg
gcattgaaagcgctggtctgcacgggttcatttattgatcagtatcatgagagtgaaaag
gctttgagctacatgggtatagtagtcgaaaatttggtctcgctggtccgctctagtcaa
tgcagtcttccgtatccattgatattagaagcaacgtcagaagtttgctctactaggccg
aagtatgtagagaaaatggttgaaggatttgaagaagctttctgttccagtttctctgat
ttctatgtcaatggaaacttcaagtcgatcgaaaattgttctcatctcctggagtgtgtg
accaataaattgcttccacgtgtgacagagattgatggtctcgagaaaagcttggtgcat
tttgctatcagtatgtggaatcaaattgaatcctctgttgttttcagttatgatttcaat
ggcagggagtttgttgaggcagcaatgaaaacaatggggcaaattgtgggagttgctttg
gtagactcacagaatagtataatccaaaaagcttacaatgtgatctcatcaagcacgctt
ccagctatggagtctattcctctgacctttgctgcattggagggtttacaacgtgacctg
tccaccagggatgaattgacactctcgctatttgcatcagttatcataggtgcatctccc
aaggcatccattccagatgtgaaaccacttataaagctgcttatggtatccttgctcaag
ggttatatcccagcagctcaagctttgggttcaatggttaacaaactggggacgggttct
ggtggaacatgttccttggaagaagcatgtgatataatattctacgagagttttgcatct
ggaaacgatatttcttcagatgactctagtaaaagtaaatgtggaagtgagacacttttg
tcaaagatatgtttaggtttctatggttcgctggaccttcagacccgcgctatcacaggt
cttgcgtggattgggaaaggtttactcatgaggggtgatggaagagttaatgagatagct
ctggtactaatggaatgcttaaaatccaccagcggttccgggaatgctctgcatccttct
gccatgaaacatgcagctgacgcattcctcatactaatgtctgattcgggagagtgtctg
aacagaaagtttcatgcagttataaggccactctataagcaacggttcttctctataaca
gttcccattttggagtcgctgattgtgaattcccagactccactctcgagaacaatgttg
catgtggctctcgcgcatattgtatccaatgttccagttacggtcatattggacaatacc
aaaaagctactcccagtgatactggaaggcttgtctgtcttgagcgttgacgctgtggat
aaagaaactctattcagtctattactggttttatctggaacgcttactgatattaaaggt
aaacaatcagtcagtgataatgcacacagaatcatcgagtgcttggtcaagcttacatca
tacccacatctaatggtggttagggagacggcgattcagtgtcttgctaccctgttggaa
ttgccccatggaagaatctatcctttcagaagagaggtattacaagcagtaacaaaggca
cttgatgatccaaaacggagagttcgggaagaagcgattaaatgcaggcaggcttggtaa

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