KEGG   Raphanus sativus (radish): 108835753
Entry
108835753         CDS       T06014                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03030  DNA replication
rsz03410  Base excision repair
rsz03420  Nucleotide excision repair
rsz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108835753
   03410 Base excision repair
    108835753
   03420 Nucleotide excision repair
    108835753
   03430 Mismatch repair
    108835753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsz03032]
    108835753
   03036 Chromosome and associated proteins [BR:rsz03036]
    108835753
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108835753
DNA replication proteins [BR:rsz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108835753
  DNA Replication Termination Factors
   ELG1-RFC complex
    108835753
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108835753
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108835753
  Check point factors
   HRAD17(Rad24)-RFC complex
    108835753
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_22 DUF815 Mg_chelatase ABC_tran AAA_29 RsgA_GTPase RuvB_N AAA_23 AAA_24 AAA_5 AAA_16 AAA_2 T2SSE TsaE ATPase_2 nSTAND1
Other DBs
NCBI-GeneID: 108835753
NCBI-ProteinID: XP_018464477
UniProt: A0A6J0LWP0
LinkDB
Position
Unknown
AA seq 354 aa
MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLITALLKQIYG
PSADKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR
CLNVRINAPSHEEIVKVLEFVAKKESLQLPHGFASRIAKKSNRSLRRAVLSLETCRVQNY
PFADNQVISPMDWEEYVAEISTDMLKEQSPKSLFQVRGKVYELLVNCIPPEVVLKRLLHE
LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtcgacaagtacaggcctaaatcgctagataaggtcatcgttcacgaagat
atcgctcagaatctcaagaaattggtaacggagcaagattgtccgcatttgctgttctat
ggaccgtcaggttcgggtaagaaaaccctaatcacggcgcttctcaagcagatatatggt
cccagtgctgacaaggtgaaagtggagaacagggcttggaaagtcgatgctgggagtaga
actattgatctggagctcactacgttatcaagcaccaatcacgtggaacttactccaagt
gatgcaggctttcaggaccgatacatcgttcaagagatcattaaagaaatggccaagaac
agacctattgacaccaaaggaaagaagggatacaaggtgttggtactaaatgaagttgac
aagctgtcacgagaagctcaacactctctgcggagaacaatggagaagtatagctcatca
tgccgtctcatcttatgctgtaacagttcttcaaaggttacagaagccatcaaatctcgc
tgtctcaatgtccggattaatgcaccttcccatgaagagatagtgaaagtgttggagttc
gttgcaaagaaagaaagtctgcaactgccacacggttttgcttctcgtattgccaaaaaa
tcaaaccgcagtcttagaagagctgttttgtcacttgagacctgtcgtgtccaaaactac
ccgttcgcagataaccaagtgatatctccaatggattgggaagagtatgttgctgaaata
tcaactgacatgttgaaggaacagagccctaaaagtttgtttcaggtgcgtgggaaggta
tatgagttgctagttaattgcattccaccagaagttgtactgaagagacttcttcatgag
ctgttgaagaaactggactcagagctgaagcttgaagtctgccactgggccgcatattat
gaacatcggatgagattgggtcagaaagccatatttcacatagaagcatttgtggccaag
tttatgagcatatacaaaaacttcctcatttcaacatttgggtag

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