Raphanus sativus (radish): 108835753
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Entry
108835753 CDS
T06014
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108835753
03410 Base excision repair
108835753
03420 Nucleotide excision repair
108835753
03430 Mismatch repair
108835753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108835753
03036 Chromosome and associated proteins [BR:
rsz03036
]
108835753
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108835753
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108835753
DNA Replication Termination Factors
ELG1-RFC complex
108835753
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108835753
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108835753
Check point factors
HRAD17(Rad24)-RFC complex
108835753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
AAA_22
DUF815
Mg_chelatase
ABC_tran
AAA_29
RsgA_GTPase
RuvB_N
AAA_23
AAA_24
AAA_5
AAA_16
AAA_2
T2SSE
TsaE
ATPase_2
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108835753
NCBI-ProteinID:
XP_018464477
UniProt:
A0A6J0LWP0
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLITALLKQIYG
PSADKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR
CLNVRINAPSHEEIVKVLEFVAKKESLQLPHGFASRIAKKSNRSLRRAVLSLETCRVQNY
PFADNQVISPMDWEEYVAEISTDMLKEQSPKSLFQVRGKVYELLVNCIPPEVVLKRLLHE
LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaagtacaggcctaaatcgctagataaggtcatcgttcacgaagat
atcgctcagaatctcaagaaattggtaacggagcaagattgtccgcatttgctgttctat
ggaccgtcaggttcgggtaagaaaaccctaatcacggcgcttctcaagcagatatatggt
cccagtgctgacaaggtgaaagtggagaacagggcttggaaagtcgatgctgggagtaga
actattgatctggagctcactacgttatcaagcaccaatcacgtggaacttactccaagt
gatgcaggctttcaggaccgatacatcgttcaagagatcattaaagaaatggccaagaac
agacctattgacaccaaaggaaagaagggatacaaggtgttggtactaaatgaagttgac
aagctgtcacgagaagctcaacactctctgcggagaacaatggagaagtatagctcatca
tgccgtctcatcttatgctgtaacagttcttcaaaggttacagaagccatcaaatctcgc
tgtctcaatgtccggattaatgcaccttcccatgaagagatagtgaaagtgttggagttc
gttgcaaagaaagaaagtctgcaactgccacacggttttgcttctcgtattgccaaaaaa
tcaaaccgcagtcttagaagagctgttttgtcacttgagacctgtcgtgtccaaaactac
ccgttcgcagataaccaagtgatatctccaatggattgggaagagtatgttgctgaaata
tcaactgacatgttgaaggaacagagccctaaaagtttgtttcaggtgcgtgggaaggta
tatgagttgctagttaattgcattccaccagaagttgtactgaagagacttcttcatgag
ctgttgaagaaactggactcagagctgaagcttgaagtctgccactgggccgcatattat
gaacatcggatgagattgggtcagaaagccatatttcacatagaagcatttgtggccaag
tttatgagcatatacaaaaacttcctcatttcaacatttgggtag
DBGET
integrated database retrieval system