Raphanus sativus (radish): 108835797
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Entry
108835797 CDS
T06014
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108835797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108835797
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
108835797
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
108835797
NCBI-ProteinID:
XP_018464519
UniProt:
A0A6J0LXG7
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All DBs
Position
8:22959795..22963266
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AA seq
679 aa
AA seq
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MARNREGLVLLVDVGPAMHSVLPDVEKTCSLLMQKKLIYNKFDEVGIIVFGTQETENELA
RDIGGYDNIWVLRNIKVVDELVIDRVKQLPRGTVAGDFLDALIVGMDMLIKTYGAGQRGK
KRLCLITNAASPTKDPFEGTKDEQVSTIAAKMAAEGIKMESIVMKADPSVDVDEKIIEEN
DHLLSLLSNNAIAKTVYVESPLSLLGALKTRRVAPVTLFRGDLEINPSMKIKVWVYKKVA
EERLPSLKMYSDKAPPSDKFAKHEVKIDYDYKVNEETSEALAPEERIKGFRYGPHVIPIS
PDEMETLKFKTEKGMKLLGFTDASNILRHYYMKDVNIVVPDPSKEKSVIAVSAIAREMKQ
SNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDIREFPFPSFSRLP
ASWKPDEQQQAVADNLVKMLDLAPSPKEEVLKPELTPNPVLQRFYEYLELKSRSTDAALP
PMDEAFKRIMEQDPELSSNTKSIMDTFRGSFEVKENPKLRKASKRMLRDKPSGSDDEDNR
MITYNANENNVDTVGDANPVQDFEAMISRRDGNDWVNKAISEMKKRVVKLVEDSSTTDKA
LECLLALRKACVLEQEPKQFNEFLNHLHELCQERKLSHFLEHFTSKKITLIPKSEAADSD
VVDEKAGDFTVKEEPNLES
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaatcgggagggtttggttttgttggtggatgtaggcccggccatgcatagt
gtactccctgatgttgaaaagacatgttctttgcttatgcaaaagaagttgatttacaac
aagtttgatgaagttggaatcattgtctttggaactcaagaaaccgaaaatgagcttgct
agagacataggtggatatgacaacatttgggttttaaggaacatcaaagttgttgatgaa
ctcgtgattgatcgtgtaaagcagctccctcgaggaactgtagctggcgactttcttgat
gctttgattgttgggatggatatgcttataaagacgtacggtgctggacaaagagggaaa
aaacggttgtgtctcatcacaaatgcagcttctcctaccaaagatccatttgaagggacc
aaagatgagcaagtcagtaccattgctgccaaaatggctgcagagggtataaagatggag
agcattgttatgaaagctgatcctagcgttgatgttgatgagaagataatagaagagaat
gatcatttgttgagtttgctctcaaacaacgccattgcgaaaacagtgtatgttgagagt
ccactctcactcctaggcgctttaaagacgcggagagttgctcctgttactctgttcaga
ggcgaccttgagattaacccatcaatgaagatcaaggtgtgggtttataagaaagtggct
gaagagagacttccctcgctaaaaatgtactctgacaaggcgccacctagtgacaagttt
gctaaacatgaagtgaagatcgattacgattacaaagttaacgaagaaactagtgaggct
cttgctccagaagaaaggatcaagggctttcgctatggacctcatgtcattcctatctcg
ccggatgagatggaaacactcaagttcaaaactgaaaagggcatgaagcttcttggattc
actgatgcatcaaacattctcagacattactacatgaaagacgtgaacattgttgttccg
gacccgagcaaagaaaaatctgtgattgcagtctctgccattgcaagagagatgaagcaa
tcaaacaaggtggcaatcgtacgttgtgtctggagaaacggacaagggaatgtagttgtt
ggagtcctcactccaaatgtgtctgaacgagatgacacacctgattctttctacttcaac
gtgctgccatttgccgaggatatccgcgagtttccgtttccttctttcagtagattacct
gcgtcctggaagcctgatgagcaacagcaagcagtggctgataacttggttaagatgctt
gaccttgcaccttctcctaaagaggaagtgttaaagcctgaacttactcctaacccagtt
ctgcagcgcttttatgaataccttgagctgaaatcaagatcaacggatgctgctttacct
ccaatggatgaagctttcaagagaatcatggagcaggatccagaactctcttccaacacc
aaatcgataatggatacgtttcgtggaagttttgaagtgaaggagaacccaaagttgaga
aaggcttctaagagaatgttgagggataagccatctggttcagatgatgaagacaatcgc
atgattacttataatgccaatgagaacaatgttgacacagtgggagatgcaaacccggtt
caagattttgaagctatgatatcccgtagagatggcaatgattgggtcaataaagcaatc
agtgagatgaagaaacgagtagtgaagctcgtggaagatagtagtaccactgataaagca
ttggaatgtttgctcgctttacgtaaagcctgcgtcttggaacaggagccgaagcagttc
aatgagttcttgaatcatctacacgagttatgccaggaaaggaagttgtctcattttctt
gaacatttcacgtccaagaagatcacgttgattcccaaatcagaagcagcagacagtgat
gtggtggacgagaaggctggggatttcactgtcaaagaagagccaaatctcgagagctaa
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