Raphanus sativus (radish): 108836064
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Entry
108836064 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108836064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108836064
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108836064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_2
CLIP1_ZNF
RRM_occluded
C_Hendra
Motif
Other DBs
NCBI-GeneID:
108836064
NCBI-ProteinID:
XP_056860681
UniProt:
A0A9W3D9Z6
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Position
3:16795945..16798841
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AA seq
289 aa
AA seq
DB search
MPRYDDRYGNTRLYVGHLSSRTRTRDLERLFNRYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGRDFDGSRITVEFSRGAPRGSRDYDSRGPPPGAGRCFNCGVDGHWARDCTAGDWK
NKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPPRRRRSPSRSRSLSRSYSRSR
SPVKRRERSVEERSRSPKRMEDSLSPRGRDRSPIMDDEGSPRIIDGSPPPSPKLEKQAGS
DHDGGGSPQNNGNGSNTVGRSADSPREDRSPVDDDYEANRASPRGSESP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgatcgttacgggaacactcgtctttatgtcggacacttgtcatcc
agaactcgtaccagagaccttgaacgccttttcaacagatacggaagagtgcgagatgtg
gatatgaagcgggactatgcttttgttgagtttagtgatccccgtgatgctgatgacgcg
agacattacttggatggaagagacttcgatggaagtcgcatcactgtggagttttcaaga
ggggcacctcgtggctctcgggactatgacagcagaggcccgcctcctggagctggtcgc
tgttttaactgtggtgttgacggtcattgggctcgagactgcactgcaggggactggaag
aacaagtgttaccgctgcggggagagaggacatattgagagaaactgcaagaacagtccc
aagaagctcaggcgaagtggaagctactccaggtcacctgtaagatcccgttctcctcct
cgtcgtagaagaagcccaagccgtagcaggagtcttagccgaagctacagccgatcaaga
tctccagtgaaaagaagagagagaagtgtcgaggagagatctcgcagtccaaagagaatg
gaggactctctatcgccaagaggcagggaccgtagtccgattatggacgatgaaggtagc
ccgaggatcatagacgggagccctccaccttctccaaagcttgaaaagcaagcaggatca
gaccatgacggtggtggcagccctcaaaacaatggtaatggcagcaacactgtgggacgc
agtgctgacagcccgagagaggaccgaagccccgttgatgatgattacgaggccaaccgt
gcttcccctagaggaagcgagtctccttga
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