Raphanus sativus (radish): 108836324
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Entry
108836324 CDS
T06014
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108836324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108836324
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108836324
03012 Translation factors [BR:
rsz03012
]
108836324
04131 Membrane trafficking [BR:
rsz04131
]
108836324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108836324
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108836324
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108836324
Translation factors [BR:
rsz03012
]
Eukaryotic type
Elongation factors
108836324
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108836324
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108836324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
108836324
NCBI-ProteinID:
XP_018464995
UniProt:
A0A6J0JXJ5
LinkDB
All DBs
Position
2:complement(20860152..20862408)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGMLKPGMVVTFAPSGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtttcacatcaacattgtggtcatcggccatgtcgactctggaaaa
tcgaccacaactggtcacttgatctacaagcttggtggtattgacaagcgtgtcatcgag
aggttcgagaaggaggctgctgagatgaacaagaggtctttcaagtacgcatgggtgttg
gacaaacttaaggctgagcgtgagcgtggtatcaccattgacattgctctctggaagttc
gagaccaccaagtactactgcactgtcattgatgctcctggtcatcgtgatttcatcaag
aacatgattactggtacctcccaggctgattgtgctgttcttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggtcagacccgtgagcatgctcttcttgct
ttcacccttggtgtcaagcaaatgatttgctgctgtaacaagatggatgccaccaccccc
aagtactccaaggctaggtacgatgagatcatcaaggaggtgtcttcctacttgaagaag
gtcggatacaaccctgacaaaatcccattcgtccccatctccggattcgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctctt
gaccagatcaacgagcccaagaggccttcagacaagccactccgtctcccacttcaggat
gtctacaagatcggtggtattggaacggtgccagtgggtcgtgttgagactggtatgctc
aagcctggtatggttgtgacattcgctccatctgggttgaccactgaggtcaagtctgtt
gagatgcaccacgagtctcttgtggaggcacttccaggtgacaacgttggattcaatgtc
aagaatgttgctgtcaaggatcttaagcgtgggtatgttgcatccaactccaaggatgac
cctgctaagggagctgctaacttcacttcccaggtcatcatcatgaaccaccctggtcag
attggtaacggttacgcaccagtgcttgattgccacacctcccacattgccgtcaagttc
tctgagatcctcaccaagattgacagacgttctggtaaggagatcgagaaggagccaaag
tttttgaagaatggagatgctggtatggtgaagatgactccgaccaagccaatggttgtt
gagactttctcagagtacccaccattgggacgtttcgctgtcagggacatgaggcagacc
gttgctgttggagttatcaagagtgttgacaagaaggacccaaccggtgccaaggttacc
aaggctgctgtcaagaagggtgccaaatga
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