Raphanus sativus (radish): 108836505
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Entry
108836505 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108836505
00071 Fatty acid degradation
108836505
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108836505
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108836505
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108836505
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108836505
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108836505
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108836505
Exosomal proteins of breast cancer cells
108836505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
108836505
NCBI-ProteinID:
XP_056865039
UniProt:
A0A9W3DMP1
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All DBs
Position
4:43598010..43605010
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AA seq
660 aa
AA seq
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MKSFAAKVEDGVRGENGKPSVGPVYRNLLSEKDFPPIDSDITTAWDIFSKSVEKFPYNKM
LGWRQIVDEKVGPYMWKTYKEAYEEVLQIGSAIRGLGAEPGCRVGIYGVNCPQWIIAMEA
CAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQETKIKGLLEPDCKCAKRLKAIISFT
NISEEHNLKASEVGVKTYSWLDFLQMGCEKSEETTPPKPFNICTIMYTSGTSGDPKGVVL
THEAVATYVVGMDLYMDQFQDKMTHEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYHGD
LNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKHKLAWLNRGY
SHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSTEIEEFLRVTCCCFVVQGYGLTET
LGGTAMGFPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIRGKCLFSGYY
KNPELTQEVMIDGWFHTGDIGEIQSNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQNS
LVQDIWVYGDSFKSMLVAVIVPNQETVKRWAKELGFTKPFEELCSLSELQEHIISELKST
AEKNKLRKFEYIKAVTVETKPFDVARDLVTATLKNRRNNLLKYYQVHVEEMYRKLASEKI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcattcgcggcgaaggtggaagatggagtgagaggagaaaacgggaagccgtcg
gtaggtccggtgtaccggaatcttttgtcggaaaaagattttcctccaatagattctgat
atcaccacagcttgggacattttcagtaaatcagtcgagaaattcccttacaacaagatg
cttggatggcgtcaaatcgtcgatgagaaagttggaccgtatatgtggaaaacttacaag
gaagcatacgaagaagttctgcagattggctctgcaatacggggtcttggagctgagcct
gggtgtcgagtggggatctatggagtaaattgtcctcagtggatcatagcaatggaggca
tgtgcggctcacactctaatctgtgtacctctatatgataccttgggatctggagcagtg
gattatatcgttgatcatgcggaaatcgattttgtattcgtccaagagaccaagattaaa
gggcttcttgagccagactgcaaatgtgctaaacggctaaaagctataatttccttcact
aatataagcgaggaacataacctcaaggcttcagaagttggagtcaaaacatactcttgg
ctcgattttctccaaatgggatgtgagaaatcggaagagactaccccgcctaagccgttt
aatatatgcaccataatgtacacgagcggcacgagtggtgaccctaaaggtgtggttttg
actcatgaagctgtggcaacttacgttgttggcatggatctttacatggaccagttccaa
gacaagatgacacatgaggatgtgtatctctccttcttgccgctggctcacattcttgac
cgtatgaatgaggaatacttctttcgcaaaggggcttccgttggctattaccatggagat
ttgaatgtgttacgtgatgacattcaagaactgaaaccaacttacctagctggagttcca
agagtgtttgagagaatccacgagggtattcaaaaggctcttcaagaacttaacccgaga
aggagacttatcttcaatgctctctacaaacacaagcttgcatggttgaatcgtggatac
tctcatagtaaagcgtcacccatggctgatttcatagccttcagaaagattagagacaaa
ctaggaggtcgaatccggttgctagtatctggaggagcacctttgagcactgagattgaa
gagttcttgagagttacttgttgttgctttgtggtccaaggctacggtctaacggagacg
cttggaggaacggcgatgggcttcccggacgagatgtgtatgctagggacagtcggtatt
ccggcggtttacaacgagatacggcttgaggaggtggctgaaatgggctacgacccactt
ggtgaaaatccagcaggcgagatctgtataagaggaaaatgcctgttttctggttattac
aagaatcccgagcttactcaagaagtcatgatagacggatggttccatacaggagatatt
ggtgagattcaatcaaatggagtacttaagataattgatcgtaaaaagaatcttatcaaa
ctctctcaaggagaatacgttgctcttgagaacttggaaaatatctacggtcaaaactct
cttgtccaagatatatgggtttatggagacagcttcaaatcgatgcttgtcgcggtgatt
gttccaaaccaagaaaccgttaaacgttgggctaaagaacttggttttactaaaccattc
gaagaactatgttctctctctgagttacaagagcacatcatttcagaactgaagtccacg
gcagagaagaacaagctaagaaagtttgagtacatcaaagcagtgacggtggagacaaaa
cctttcgatgtagcgagagacttagttactgcaacgctcaagaaccggaggaacaacctg
ctcaagtattatcaggtacacgtcgaggagatgtaccgaaaattggcgtcagagaaaatc
tga
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