Raphanus sativus (radish): 108836535
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Entry
108836535 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108836535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108836535
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108836535
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108836535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
108836535
NCBI-ProteinID:
XP_056860159
UniProt:
A0A9W3D8S0
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Position
2:18431371..18432351
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AA seq
274 aa
AA seq
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MHCGSSNTNDSSSSHFQKMQRTDDKLRLAILDFEVFDCIICIEPLTAPIFQCDKGHLVCS
SCCHKFRNKCTLCNLPTGGKKCRTVEKVIESIGIPCSVLGCAKNVCYGEISDHERECIFP
LCACPVPDCKYTASYKDVYVHYNFVHQKISSFERCMLDIFTSGISFIIELNINAKVSIMR
EHEKSLLFAFQCFRKLYGVYVTVCCIAPSSPEVEEFSYDLSYDVGGQTMIHKSLKVKRIR
QLSLQIPQDNFMLIPQNLLHGVRLNIEVSIKRMD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtggttcaagcaatacaaatgactcaagcagcagtcactttcagaaaatgcaa
agaacagatgataagctacgcttggccattctcgattttgaagtttttgattgcattatt
tgtattgagccactcactgctccaatattccagtgtgataaaggccatctggtttgctct
tcttgctgccataaattcaggaacaaatgtactctttgtaatttgcctactggcggcaaa
aaatgtagaactgtggaaaaagttattgaatcaattggtatcccatgctccgtgctaggt
tgtgccaaaaatgtatgttatggagaaatatcagaccatgaaagagaatgcatattccct
ttatgtgcatgcccggtaccagactgcaagtacactgcctcatacaaggatgtctacgtt
cactataactttgtccaccagaaaatttccagcttcgaaagatgtatgctcgatattttc
acatctggcatatcttttattatcgagttgaacatcaacgccaaggtatcaattatgagg
gaacatgagaagagtttattgtttgcatttcagtgtttcagaaagctgtatggtgtgtat
gtaactgtatgttgcattgcaccatcttctccagaagtcgaagagttctcatacgatctt
tcttacgatgtgggtggacaaactatgattcacaaatcactaaaagtgaaaaggattcgt
caattgagtcttcagatccctcaagacaattttatgttgatccctcaaaatttattacat
ggtgtacggttaaatatagaggtttctatcaaaaggatggactaa
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