Raphanus sativus (radish): 108836894
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Entry
108836894 CDS
T06014
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108836894
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108836894
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108836894
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
108836894
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108836894
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108836894
Prokaryotic type
108836894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108836894
NCBI-ProteinID:
XP_018465492
UniProt:
A0A6J0LZJ0
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Position
3:complement(22502063..22504706)
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AA seq
576 aa
AA seq
DB search
MSDEAPPPAHQLASVSSSNDESSSSTAQKARFSDRVRIRSILGRPDGGAGLAGQKVRISG
WVKTGREQGKGAFAFLEVNDGSCPANLQVMVDASVSDLSRLIATGTCVTVDGCLKIPPEG
KGTKQKVELSVVEVVDVGTVDTATYPIPKTKLTLERLREFPHLRSRTNSISAIARIRHAL
AIATHKFFDEEGFLYIQTPIITTSDCEGAGEMFQVTTLINHTEKLERDLIENPPPTEADV
EAARAIVKARGEAVAQLKAAKASKEEITASVAELNEAKVSLARTEERSRLKPGLPKADDG
KIDYSQDFFGRQAFLTVSGQLQVETYACGLSDVYTFGPTFRAENSHTSRHLAEFWMVEPE
LAFADLEDDMNCAEAYVRYMCKWLLEKRYDDMELMAKNFDKGCIDRLKLVASTPFGRLTY
TKAIEVLEEAVAKGKKFENPVEWGIDLASEHERYLTEVVFQKPLIVYNYPKGIKAFYMRL
NDDGKTVAAMDVLVPKVGELIGGSQREERIDVIMERIEEMGLPVEPYEWYLDLRRYGTAK
HSGFGLGFERMVLFATGMDNIRDVIPFPRYPGRADL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaggctccgccgccggcacatcaattagcctccgtctcctcatccaacgat
gaatcctcatcctcaacagcgcagaaagctcgtttctcagatcgagtccggatccgatcg
atcctgggccgacccgacggcggagccgggctcgcgggtcagaaggtccgaatcagcggg
tgggtgaaaaccgggagggagcaagggaaaggcgcattcgctttcctcgaggtgaacgac
ggatcgtgcccggcgaatctccaggtcatggtggacgcctcggtctcggatctctcgagg
ctgatcgcgacggggacttgcgtgaccgtcgacgggtgtttgaagattcctccggaaggg
aaagggacgaagcagaaggtggagcttagcgttgtggaggtggttgatgtcgggacggtg
gatactgccacgtacccgattccgaagacgaagcttactcttgagaggttgagagagttt
cctcatcttcgttcgaggaccaactcgatctctgccattgcaagaatccgacacgcgctt
gctatagccacccacaaattcttcgatgaggaaggcttcctatacattcagactccaatc
atcacaacaagtgactgcgaaggagctggagagatgttccaagtaacaactctgatcaac
cataccgagaagctggagagggatctcattgagaaccctccgcccaccgaggctgacgtc
gaagccgccagggccatcgtcaaggcgagaggtgaagccgtggcgcagctcaaagctgct
aaagcaagcaaggaagagatcactgcttccgttgctgagctcaacgaggcgaaagtgagt
ttagctaggaccgaagagaggtcaagactcaagcctggattgcctaaagctgatgatggg
aagattgattactcgcaagatttcttcggtcgtcaagcgttcttgacggtgtctggtcag
ttacaagtggagacttacgcttgcggactcagcgatgtgtatacgtttggccctactttc
cgggcagagaactctcacacctcgaggcatcttgctgagttctggatggttgagcctgag
ttagcttttgctgatctagaggacgatatgaactgcgcagaggcgtatgtgagatacatg
tgcaagtggctgcttgagaaacgttacgatgacatggagctcatggcgaagaacttcgac
aaaggctgtattgataggctgaaactggtagcgtcgactccgtttggtcgtttaacgtac
accaaagcgatagaagtgcttgaggaagctgtggcgaaaggaaagaaatttgagaaccca
gtggagtggggaatcgacttagcatctgagcacgagagatacttgacagaggttgtgttt
caaaagccgctgattgtgtacaactacccgaaaggaatcaaagcattctacatgagactt
aacgatgatggaaagacagtggctgccatggatgtccttgttccaaaggttggagaactc
attggtggaagccaaagggaagaaaggattgacgtcatcatggaaaggattgaggagatg
ggactaccagtggagccatacgagtggtacttggacttgagacgttacggaacagcgaag
cattcagggttcggacttggattcgaacgtatggttctgtttgcgacaggaatggacaac
atcagagacgttattcccttccctcgctatcctggcagagctgacctctaa
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