Raphanus sativus (radish): 108837026
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Entry
108837026 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108837026
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108837026
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108837026
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108837026
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108837026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108837026
NCBI-ProteinID:
XP_056866620
UniProt:
A0A9W3DS28
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All DBs
Position
5:complement(32621885..32625613)
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AA seq
742 aa
AA seq
DB search
MSPFLLIGCLMLAFLLIRRQWRSAAVKREEVLRLISLATEESYLAAQQKDEEEEQEAATV
DYYYGSSSSSSVPPPDDDDVYRCAVCHSPTTTRCSQCKSVRYCSSKCQILHWRRGHKEQC
RSPSLPHDETELPSADGLHGPETNDRVVNNDDGVSVDHISTSRPSVQKVQQANSEAVDFT
TSLNKTDNFYETKPLSRKKSHHRTEKVESSRKHSKGKATTLLTPDAKPQNSRTSVEHQGE
KNALGHEKTTSEPSTSAPSATLSSSAIPLPSKAKVSQASSTSSGLKTSMQRVVQHFRPPK
SSKLTQPSSSINEMSFSYEMFVKLYSDRIELQPFGLVNLGNSCYANVVLQCLAFTRPLIS
YLIRGLHSKACRKKSWCFVCEFEFLILKSRGGESPLSPIKILSRLQKIGKHLGPGKQEDA
HEFLRCAVDTMQSVFLKEADAAGSFAEETTLIGLTFGGYLHSKIKCMKCLHKSERTELMM
DLTVEIGGDIGSLEEALAQFTAYEVLDGDNRYLCDRCKSYQKAKKKLMILEGPNILTVVL
KRFQSDNFGKLSKPIHFPELLDIGPYMSNPNQGDHHQVYSLYAVVVHLDATSYSGHYVCY
IKNLHGDWFKIDDSNVFPVPLETVLLEGAYMLLYARDSPRPVSKNGGRKSKERRNLSAIP
SRHDNNNSKKKKQEKDSSSSSLLPRVNLSSGSLSSLFSSSETTSSCSTKDSSGFENLSDY
LFGGVEPVWNQDHHVSSTQTFY
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttttctcttaattggatgtctgatgctggctttcctcctaatccggcgccaa
tggagatccgccgccgtgaaacgggaggaggttcttcggcttatctctttagccacggag
gaatcttatctggcagcgcagcaaaaggatgaggaggaggagcaggaggccgccacggta
gattactactacggttcctcttcttcttcttctgttcctcctcctgatgatgatgatgtt
tatcgttgtgcggtttgtcacagccccaccactactcgctgctctcaatgcaaatccgtc
cgttactgttctagcaagtgccagattcttcattggcgacgaggtcacaaggaacagtgt
cgttcgccttctcttcctcatgatgagactgaactaccatcagcagatgggttacatggt
ccagagacaaacgacagggtggtgaataatgatgacggcgtgtctgttgatcacatctct
acgagtaggcctagtgttcaaaaggtacaacaagccaactctgaagctgtggacttcact
acttctctaaacaaaacagataatttctatgagacgaagccattgagtagaaagaagtct
catcatcgcacagagaaagttgaatcgtctagaaagcattctaaaggcaaggctactact
ctacttactcctgatgcaaagccgcaaaattcacgtacgtcagtggaacatcaaggagaa
aagaatgcacttggacatgagaaaacgacgtctgaaccatctactagtgctccttctgct
acactgtcgtcttcagctattcctttaccttcaaaagctaaagtatcacaagcttcttca
actagtagtgggctgaaaacatcgatgcaaagagttgtccagcattttagaccccctaaa
tcgtcaaaactaactcaaccttccagctctatcaatgagatgagcttttcttatgagatg
tttgtcaaactttacagtgatagaatagaattacagccatttggccttgtcaacttgggg
aacagttgttatgcaaatgttgttctccagtgcttggccttcactcggccacttatttct
tacctaattaggggattacattctaaagcatgtcgaaagaagagttggtgttttgtttgt
gagtttgaattcttaattttaaagtcaaggggaggagaatctcctctctcacctatcaaa
atcttatcaagattacaaaagattgggaagcatcttggccctggaaagcaagaagacgct
cacgaatttttaaggtgtgctgttgatacaatgcaatcagtttttctcaaagaagctgat
gcagctggttcctttgcagaagaaactactttaataggccttacctttggtggttatctt
cactccaagattaaatgcatgaaatgcctgcacaagtctgagagaacggagctgatgatg
gatctaactgttgagattggtggagatataggaagccttgaagaagcacttgctcagttt
acagcctatgaagtcctagatggagacaaccggtacttgtgtgacagatgtaaatcttac
cagaaagccaaaaagaaactgatgatactggaaggtcccaatattcttactgtggtattg
aaacgtttccagtctgataactttgggaagctgagtaaacccattcactttcctgagctt
ctcgatattggcccatatatgagtaacccaaatcaaggggatcatcatcaagtgtatagt
ctttacgcagtggtggtccatttagatgccacttcatattcaggtcattatgtttgctac
atcaaaaaccttcatggagattggttcaagattgatgacagcaatgttttcccggttcca
ttagagactgtgttactagagggagcatacatgcttctctatgcaagagattctcccaga
ccggtgagcaagaacggtggtcggaaatcaaaggaaagaagaaacttatctgcaatcccg
tcgagacacgacaacaacaacagcaagaagaagaagcaggagaaagacagtagtagtagc
agtttgttgccacgagtaaatttgtccagtggaagtttatcatcactgtttagctcatca
gagacgacaagctcatgcagcacaaaagactcgtcaggttttgagaatttatcagattac
ttgtttggtggagttgaaccggtttggaatcaggatcatcatgtttcatctactcaaacg
ttttattga
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