Raphanus sativus (radish): 108837391
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Entry
108837391 CDS
T06014
Name
(RefSeq) PHAF1 protein At3g51130-like
KO
K27411
phagosome assembly factor 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108837391
Membrane trafficking [BR:
rsz04131
]
Autophagy
Other autophagy associated proteins
Others
108837391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
108837391
NCBI-ProteinID:
XP_018465947
UniProt:
A0A6J0M0X3
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All DBs
Position
2:2900545..2903742
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AA seq
405 aa
AA seq
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MTQRSAVMQRTRRRCEGTAMGATVFDLRPGVGIGPFSIGMPICDAFAQIEQQPNIYDVVH
VKYHDEDPLKLDIVISFPDHGFHLRFDPWSQRLRLVEIYDVKRLQMRYATSTIGGPSALA
TFVAVYALFGPTFPGIYDKERGVYSLFYPGLSFQFPIPNQYTDCCHDGEAALPLEFPDGT
TPVACRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHVKLGKELYFTVGGQHVP
FGASPQDVWTDLGRPCGIHPKQVDQMVIHSASDPRPKTTLCGDYFYNYFTRGMDILFDGE
THRAKKFVLHTNYPGHADFNSYIKCNFVISVGESEAEANRGGNKITPRTNWEQVKEILGE
CGPAAIQTQGSTSNPFGSTYVYGYQNIAFEVMKNGHIATITLFQS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaagatcggcggtaatgcagagaacaagaagacgatgcgaaggtaccgccatg
ggcgccaccgtcttcgatctccgtcccggcgtcggcatcggacctttctctatcggaatg
ccaatttgtgatgcgtttgcgcaaatagagcagcagcccaacatatacgatgttgttcat
gttaaataccacgacgaggatcctctgaagctggatattgttattagctttccggatcat
ggttttcatcttcgctttgatccatggtctcagaggttacgccttgttgagatttatgat
gtcaagcggcttcagatgcgttacgccacttctactatcgggggtccatcagctctggcg
acgtttgtggctgtttatgcactttttggaccgacatttcctgggatttatgataaagaa
agaggggtttattctctcttctacccggggctatcctttcagtttccaattcctaaccag
tacacggactgctgccatgatggagaagcggcgctaccattagagtttccagatggcacc
acgccagtagcatgccgggtctctatctatgacaactcgagcgacaaaaaagttggtgta
ggaaagctgatggatagagcttctgtccctcctttacctcctggcagcctttatatggaa
gaggttcatgtcaagcttggcaaggagttatactttactgttggaggccagcatgtacct
tttggtgcatcgccacaggatgtatggaccgacttaggacgaccatgtgggatacaccca
aagcaggtagatcaaatggttattcattctgcatcagatccacgaccaaaaacaactctt
tgtggtgattacttttacaactattttactcgtggcatggacatcctgtttgacggcgag
actcacagagctaagaagtttgttcttcacaccaactatcctggtcatgctgatttcaac
tcgtacataaagtgcaactttgtgatctctgttggagagagtgaggcagaagcaaacaga
ggtggaaacaagatcactccaagaacgaactgggagcaagttaaggaaatacttggggag
tgtggaccagcggctatacagacacagggctcgacgagcaacccatttggatcgacatac
gtgtatggctatcagaatattgcttttgaggtgatgaagaacggtcatatagccactatt
actttgttccagtcatga
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