Raphanus sativus (radish): 108837667
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Entry
108837667 CDS
T06014
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108837667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108837667
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
108837667
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108837667
mRNA degradation factors
5'-3' decay
Decapping complex
108837667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
108837667
NCBI-ProteinID:
XP_018466199
UniProt:
A0A6J0M2A0
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All DBs
Position
4:30675712..30676782
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AA seq
292 aa
AA seq
DB search
MSRLPSKKLLDDLYSRFVLNGPEEEKQSLNGLMFLVESAHWYYEDDVVENDQTLKSLSFR
EFTCLLFNNSDVLRPYAANMDKILRDFFAYKSRVPVAGAIILDETYERCLLVKGWKRSSR
WSFPRGKKNTNEEDDVCAVREVLEETGFDVSKMLKKEEYIEFTFEGKKRVRLYIVVGVRD
DTVFAPLTKKEISQIAWHRLDGLESGFAGLKLFMVAPFLASLKSWMSSKHLMSPLSIDKP
LKPPLCVWSAVTTKIKTTTTTKTEIRRYNVKPWKQSVKVNKSAILPALGICS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggctcccgtcgaagaaacttcttgacgatctttacagtcgatttgttttgaac
ggtcccgaggaagaaaagcagtctttgaatggactcatgtttcttgtagagagcgctcac
tggtactacgaagatgacgtcgtcgaaaacgaccaaaccctaaagtcgctgtctttcaga
gagtttacttgtctcttattcaacaactctgatgtgttgagaccttacgctgcaaacatg
gataagatattgagagactttttcgcttacaagtctcgagtcccggtcgctggtgcgatt
atccttgacgagacatacgaacgttgcttgctggtcaagggatggaaacgatcatccaga
tggagcttcccacgagggaagaagaatacgaatgaagaagatgatgtttgtgctgtacgc
gaagtccttgaggagacagggtttgatgtatcgaagatgctaaagaaagaagaatacatc
gagtttacattcgaaggaaagaaaagagtgcggctttacattgtggttggcgtgagagat
gacacagtttttgcaccgctaacgaagaaggagatcagtcagatcgcatggcatcggctt
gatgggcttgaaagtggattcgctggtctcaagttgtttatggttgcaccttttcttgca
tccctgaagtcgtggatgtcatcaaagcatctcatgtctcctctgagcattgataagccc
cttaaaccaccactctgcgtgtggagtgcagtaacaaccaagataaagacaacgacaaca
acaaaaacggaaataagaagatacaatgtaaaaccgtggaaacagtctgtaaaggtcaac
aagtctgcaattttgccggccttgggaatttgttcttga
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