KEGG   Raphanus sativus (radish): 108837973
Entry
108837973         CDS       T06014                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03020  RNA polymerase
rsz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108837973
  09124 Replication and repair
   03420 Nucleotide excision repair
    108837973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsz03021]
    108837973
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108837973
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108837973
Transcription machinery [BR:rsz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     108837973
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108837973
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108837973
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 108837973
NCBI-ProteinID: XP_056858562
UniProt: A0A9W3D405
LinkDB
Position
2:21443271..21444968
AA seq 177 aa
MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR
DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ
AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVINDPAAAA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccacatagtgttggagcgaaacatgcaattacatcctcgattctttggtcgc
aaccttcgtgaaaatctcgtctctaagctcatgaaagatgtcgagggcacttgcagtggg
cgacatgggtttgtagtggcgataacaggaatagaaagcgtagggaaaggattgatccga
gatgggactgccttcgtcaccttccccgttaagtaccagtgcgttgttttcagacctttc
aaaggcgagattttggaagctgttgtcactttggtcaataagatgggtttcttcgctgaa
gctggccctgttcagatttttgtgtccaagcatttgattccagatgatatggagtttcag
gctggagacatgcctaactacacgacatctgatggatcagttaagatccagaaagaatgt
gaagtaaggctaaagattattggaacaagagtcgatgccactgaaatcttttgtgtgggt
accatcaaagacgattttttgggagtcatcaacgaccctgcagccgctgcataa

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