Raphanus sativus (radish): 108838101
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Entry
108838101 CDS
T06014
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108838101
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108838101
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108838101
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
108838101
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108838101
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108838101
Prokaryotic type
108838101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
108838101
NCBI-ProteinID:
XP_056845027
UniProt:
A0A9W3C0I7
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All DBs
Position
6:4170235..4172683
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AA seq
449 aa
AA seq
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METKELLDENLSLKQEIKRLSDENLSLKQLFDEKQSSSKQEIKQQSSSDDDERETESPSS
SSSSEQQTVTPWSVRGKIIDHEKVIKQFGCKKIDEPLIDRVERLTCRRAHVFLRRGVFFA
HRDLDKILDRYERGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQEAFKVPLVIQITDDE
EKIWKKLNKEESKRLGRENVKDIIACGFDASNTFVFSSYATVGGALYENLVEIADCITVN
KANSTFGFTGEVSTAKMIFPSVQAAPSFSSSFPHLFPAKKNIPCLIPCAIDQDPYFRLTR
DVAARLEFIKPALIESKFLPALRGNNGKMSASDPNSAIYMNDSNAHIEKNIKSSVSGGRD
NKEDQKKYGANLKEDIPFQYLSFFLEDDAELEHIKKEYGEGRMLTGTVKNRLTQVVIEIV
ERHRRARAAVTEEMVDAFMAVRPLPYMFE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaaagagttgttggatgagaatctgagcttgaaacaggagatcaaacggttg
tcggatgagaatctgagcttgaaacagttgtttgatgagaaacaaagctcctcgaaacag
gagatcaaacaacagtcctcgtcggatgatgatgagagagagactgaatcaccatcatca
tcatcatcatcagagcagcaaaccgtgacaccctggtctgtccgcggcaaaatcatcgat
cacgagaaggtgatcaaacagtttggctgcaagaagatagacgagccgctcatcgatcgt
gtcgaaagactcacttgccgtcgagctcacgtcttcctccgccgtggtgtcttcttcgcc
cacagggatcttgataaaatcttggaccgttacgagagaggagacaagttctacctttac
actgggagaggaccttcgtcagaatctttgcatttagggcatttgattcctttcttgttt
accaagtacttgcaggaggctttcaaggtccccctcgttatacagattacggacgatgaa
gaaaaaatctggaagaagttaaacaaggaggagagtaaaagactcggcagagagaacgtg
aaagatatcattgcttgcggtttcgatgcctcgaatacctttgttttctccagctacgcc
actgttggcggtgcgttgtatgagaatctggtggagattgcggattgcatcacggttaac
aaggctaactccactttcggctttaccggcgaagtttctaccgcgaaaatgatcttccct
tctgttcaggcagctccatctttttctagctcgttcccacacttgttccctgccaaaaaa
aatatcccttgcttgattccctgtgcaattgaccaggatccctacttcaggctgactcgt
gatgttgcagctcggttagagtttataaagcctgctctgattgagtcaaagtttcttcct
gcgttgcggggaaataatgggaaaatgtcagcaagtgatccaaattccgctatttatatg
aatgatagcaatgcccacattgaaaaaaatataaagagttctgttagtggtgggcgagat
aacaaggaagatcaaaaaaaatatggagcaaatctgaaggaagacataccgtttcagtat
ttgagtttcttcctcgaagatgatgccgaacttgaacacataaagaaggagtatggagaa
ggacgaatgttaaccggaacagtaaagaatcgtctcacccaagttgtgatagaaattgtt
gagagacaccgcagggctcgagctgctgttactgaagagatggtcgatgcgttcatggct
gtgagacctctcccatacatgtttgagtaa
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