Raphanus sativus (radish): 108838114
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Entry
108838114 CDS
T06014
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108838114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108838114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108838114
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108838114
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108838114
Exosomal proteins of other body fluids (saliva and urine)
108838114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Syntaxin_2
Synaptobrevin
Piezo_THU9_anchor
Prominin
DUF5089
DUF2207_C
DUF3675
DUF6468
OppC_N
ISG65-75
Motif
Other DBs
NCBI-GeneID:
108838114
NCBI-ProteinID:
XP_018466589
UniProt:
A0A6J0M3C1
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All DBs
Position
1:3195614..3196948
Genome browser
AA seq
306 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKLAMKDDLESGPDPDLEMANNTTDESLSSFLEEAEKVKAEMSLI
TETLSRISQYNDESRSAHKADSVKSLRDKISNEIVSGLRKAKSIKATLEEMDRANREIKR
LSGTPVYRSRVAVTNGLRKKLRESMMEFQALRQRMMSEYKETVERRYFTVTGERPDEAMI
EKIITDGGEEFLARAVQEHGRGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVE
AQGEQMDEIEHHVMNASHYVKDGAKELNTAKKHQRSSRKWMCIGIIVLLLIILIVIIPII
TSFTSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctaatgaccaaatcgttcacaagctacgtcgacctaaaaaaattagcaatg
aaggatgatctcgaatcaggaccagaccccgatctcgagatggcgaacaacaccacggac
gagagcctctcctctttcctcgaagaagccgagaaagtgaaagcggagatgtctctgatc
accgagacgctctcccggatctcgcagtacaacgacgagagcagatccgcgcacaaggcg
gactccgtgaagtctctccgcgacaagatctccaacgagatcgtctccggtctaaggaaa
gcgaaatcgatcaaggccacgctcgaggagatggacagagcgaaccgggagattaaacgg
ttatccggaactccggtttacaggagcagagtggcggttacgaacggtttgaggaagaag
ctgagagaatcgatgatggagttccaggcgctgaggcagaggatgatgagcgagtacaaa
gagacagttgagagacggtacttcaccgttactggtgagagaccagacgaagctatgatc
gagaagattataaccgacggaggtgaagagtttctcgcacgtgcggttcaggagcacggg
agagggaaggtgttggagactgtggttgagattcaagacaggtatgatgcggcgaaggag
atagagaagagcttgttagagctacaccaagtgtttctagacatggctgtgatggtcgag
gcgcaaggcgagcagatggatgagatcgagcatcacgtgatgaacgcgagccattacgtg
aaggacggtgctaaggagttgaataccgcgaagaagcatcagagaagcagtaggaaatgg
atgtgcattggtatcattgtcctgctcttgatcattctcatcgtcatcatccccatcatc
accagtttcacctcttcttga
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