KEGG   Raphanus sativus (radish): 108838438
Entry
108838438         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108838438
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108838438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108838438
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108838438
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108838438
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 Baculo_IE-1 zf-ANAPC11 RING_XB3-XBAT31 Sina_RING zf-rbx1 zf-Nse
Other DBs
NCBI-GeneID: 108838438
NCBI-ProteinID: XP_056847012
UniProt: A0A6J0K5W6
LinkDB
Position
7:complement(16857853..16860356)
AA seq 438 aa
MGEELADTMNLDLNLGPGPDESDLQPTLNETVNLADWTNEPSERSSDAVTRIRTRHRTRF
RQLNLPIPILSETHMAIELNQLMGSPVTGAALQTGEGSERGNEDLKMCENGDGAIGDGVS
EKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLFQWLQISEAKECPVCKG
EVTPKTVTPIYGRGNHKREVEESLDTKIPMRPHARRIESLRNTIQRSPFTIPMEEMIRRI
QNRFERDSTPVPDFTNREASERGNDRANSILNRLMTSRGVRSEQNQASAAAAAIAAASED
INLNPDIAAPDLEGETTTRFHPLLIRRQLQSHRVARISNFTSALSSAERLVDAYFRTHTL
GRSHQELNHHSPVVVDDRDSFSSIAAVINSESQVDTAVEIDSMVTLSTSSSRRRNENGSR
VSDVDSADSRPPRRRRFT
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgggtgaggagttagctgacacaatgaacctagatttgaatttagggcctggtcctgat
gagtcagatctccagccgaccctgaatgaaactgtgaatctggctgattggactaatgag
ccgtctgagagatcctccgacgctgtgacgaggatcagaactcggcataggacgcggttc
agacaacttaatctccccataccaattctatctgaaacccatatggctatagaactgaac
cagttgatgggaagtcctgtaaccggagctgctttgcagactggtgaaggcagtgaaaga
ggcaatgaggatctcaaaatgtgcgagaacggagatggagccattggagacggtgtgtca
gagaagaaagcggatgtggagaaaagcagtggcagcgatggtaacttcttcgattgtaat
atatgtttggatttgtcaaaggagccggttctcacctgctgtggccatctttactgttgg
ccttgtctgttccaatggctacaaatctcggaagctaaggaatgtccggtctgcaaagga
gaggtgactcctaaaacagtgacaccaatatatgggcgtgggaaccataaaagagaagtt
gaagagagtttagataccaagatcccaatgagaccgcatgcgagacgcatcgagagtttg
aggaatactattcaaaggtcgccttttacaataccaatggaagagatgattagacgtata
cagaataggttcgagagggattcaacccctgtccctgattttactaaccgcgaggcatca
gaaagaggaaacgatcgagccaactcgattcttaaccggttgatgacttctagaggagtt
agatcagagcagaaccaggctagcgctgcagcagcagccattgcagcagcatcagaggat
attaatctaaacccggacattgctgctcctgatcttgaaggagagaccaccacaagattc
caccctctgttgatcaggagacagttacagtcacacagagtggctcggatctcgaacttc
acatctgcactgagttctgctgagaggcttgtagacgcgtattttagaactcatacattg
gggaggagccaccaagagctaaaccatcattctcctgttgtggttgatgatagagactca
ttctcgagcattgcagctgtgataaactctgagagtcaagtggatactgcagttgagatt
gattcaatggtcactctttcgacatcttcatcgaggagaaggaatgagaatggctccagg
gtttctgatgtagacagtgcagattctcgcccgcctaggagaaggagatttacttga

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