Raphanus sativus (radish): 108838703
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Entry
108838703 CDS
T06014
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108838703
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108838703
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108838703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
DUF2921
PHD_NSD
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_4
zf_RING_Vps8_fungal
IBR_1
Motif
Other DBs
NCBI-GeneID:
108838703
NCBI-ProteinID:
XP_056842805
UniProt:
A0A9W3BTZ0
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All DBs
Position
6:22933524..22937391
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AA seq
559 aa
AA seq
DB search
MKKSNLGLGFLLCLSILVSQQANGLRPIRDTSRSWGDQLLFGKKEVSSGPSGPFSAWNIT
GTYRGNWKFQDTVNSSSKFPDFRNQFGNSVIDLFTTPTKITGVHYVQGAVVFHDVFDNEH
NVGGAQIKVEGVYIWPFRQLRLVANSGKNGGDSGLEDDYLLSNPYHLLGIFSTQVLQESP
RDRMMSKQKASPIHEMEKHCNIEIAAQISRASSTENSGDKDYFHIEGLMESPAVDDDDGD
CFSPLLLNATSINVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIVMI
GQQAIMDSYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATRPSNSG
EGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRWVLLLMYSFWIPQIVANVVRDSRK
PLHPYYILGMTVTRLAIPLYVFGCPKNFMRVEASKAWCIGLCAFIGFQAAVLLLQHYFGS
RCFVPRKMLPEKYNYYKRLDHDVNRSRDCVICMATIDLRRRTNDCMVTPCEHLFHSGCLQ
RWMDIKMECPTCRRTLPPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgaatttgggattagggtttttgttgtgcttgtcaattctggtttctcaa
caagccaatggactcagacccatcagagacacctctcgatcctggggagatcagttgctc
tttggtaaaaaagaagtaagcagcggaccatccggaccattttccgcttggaatattaca
ggaacatacagaggcaactggaagtttcaagatactgtaaatagctcttccaaattccct
gacttccgtaatcaatttggcaactctgtcatcgacttattcactactcctactaagatt
actggtgtccattatgttcagggtgctgttgttttccatgacgtttttgacaatgaacac
aatgtgggtggtgcccaaattaaagtcgaaggtgtttatatctggcccttccgacaactc
cgtcttgttgctaacagcggaaagaatggtggtgattcaggccttgaagatgattatctt
ctctccaacccctatcatctgctcggcattttttccactcaagttcttcaagaatctcca
agagacagaatgatgtctaaacaaaaggcttctccaatacatgagatggagaagcattgt
aatatcgaaatagcagctcagatttcccgagcctcttctactgaaaacagtggggacaaa
gattattttcacattgaaggattgatggaaagtcctgcagtagacgacgacgacggagat
tgtttctcccccttgttgctgaatgcaacctccataaacgttgaagtctactacaacaaa
gctgtcaactatacattgatggtcacttttgtctccttcctccaggttcttttgttgatt
cggcaaatggagcacagtaacacacaatccggtgctgcaaaggtctccattgtaatgata
gggcaacaagccatcatggattcttatctatgccttttacatcttactgccgggatttta
gttgaatcattgtttaacgcgttcgcaacagctgccttcttcaagtttgtagtgttctcg
atatttgagatgagatatcttctggccatatggaaagcaaccaggccttcaaacagcggt
gagggctgggagacaatgaggcgtgagctctcctttctctacagccgtttctatggaatc
cttcttggaggcatattgataatgtatgagctccacaactacatgcgctgggtcctcctt
ctcatgtactcattttggattccgcagatagtcgcaaacgttgttcgtgattctagaaag
cctctgcacccttattatatcttggggatgacggtcacacggcttgccatacccttgtat
gtatttggatgccccaagaacttcatgcgtgtagaggccagcaaagcctggtgtataggc
ctgtgcgcattcatcgggtttcaagctgctgttcttcttcttcagcattattttgggtcg
cgttgctttgttcctcggaagatgttacctgagaaatacaactactacaaaagattagat
catgatgtaaacagaagcagggactgcgtaatatgtatggccacaattgatctaaggcgg
cgcaccaatgattgcatggtaacgccatgtgagcatttattccactcgggatgcttacag
agatggatggatataaagatggagtgcccaacatgtcgtcgcacacttcctccagcttaa
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