KEGG   Raphanus sativus (radish): 108839021
Entry
108839021         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108839021
  KO
K12825  splicing factor 3A subunit 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108839021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108839021
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108839021
 Complex B
    108839021
 Complex C
   U2 SnRNP specific factors
    108839021
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 108839021
NCBI-ProteinID: XP_056858911
UniProt: A0A9W3D4W8
LinkDB
Position
2:28483812..28488148
AA seq 839 aa
MATKRQEKTSFIKDVARLVSQKGLETEKTLVALNKDNGEKFSFLLRSDPYHAYYQDKLNY
YRKEVAQVTSRPHAPPATASHNCSVADDGEEEAFCLLPTYSTLWSSSFSRPPGISLKDLY
IMKLTAQFIARYDMHFLRALKEHVAQNPKPQFDFLKPTSSRFKFCGGLVRGYASVIRPYI
ESLMRDGGGIMPLVLPPGECWTRYDDYDDMPLCLQFFFDRLQLEKLEAGDEMALIDLHAF
VSGVDFFAQRDNDAFATVMSTTPHLSKMMYEWPQMQPSKLVSDDDTEPELIDAPRSYEIL
EKQLTLKELGIIKLTAMFVARYGSEFRRDLMEVVLMNPLFEFLQPSDCKCSKFFSSLVRV
YSTVIMPSDKLWYGDDSTAFALEFFSRTLQLEKLENGDETAAIDLHALVGGVDCFSHMSE
SLFLAFAPQPEHLSTMVKRRGCQLLTEFHKADDENLDGTDQPDGVARPYRFKSSFKFPEK
GITVRELGVIMLTAQFVQRYGEKFRLGLRRRVVMNTQFGFMVFGDRRHYFYCGLLCAYRS
VLRPCKRMKRSAAYTDTVLDMFFEILQSQEGERIGLHDFVGLVDWFAHVEEEYYSVVVPA
PVHVLMNMIPPTLRLPNTLLLPPMKPSVTHDPAQRRHDHLASPAGRSTLREEYIIKVTAQ
FVVRYGTSFERALRRRVAETPKFEFMKPTGRKFRLYASCVEGFAQVLEPCKKRVDCMDTV
LEGLFCFLDREHEEAVGIGLHGFVDVVDCFASMDHVVPQCLIPPGCQVHLRAHGQPSRRG
MKRPAPFEEPEPNRKRAKKTNRLESGLGPEEDHSHAKHPGWSTSITVFVPNVGEVKVAG
NT seq 2520 nt   +upstreamnt  +downstreamnt
atggctacaaagcgacaagagaagacaagttttatcaaggatgttgctcggttggtttcc
caaaagggtttggagactgagaagacgctggtggcccttaataaggataatggtgaaaaa
tttagctttttgttgaggtcagacccttatcacgcatactaccaggataagcttaattat
taccgtaaggaggtggctcaggttaccagcaggcctcatgctcctccggctactgctagt
cataattgctctgtagctgatgatggtgaagaagaagccttttgtctgttgcctacttat
agtactctgtggagtagttcgttcagtcgtcctcctggtatctcactcaaggatttatat
atcatgaagctcactgctcagtttatagcgcggtatgacatgcactttctgcgagctttg
aaggagcatgtggctcagaatccgaaacctcagtttgattttttgaagccgactagtagc
aggtttaagttctgtggtgggcttgttcgtggttacgccagtgtaataaggccatacata
gaatctctgatgagagatggtggtggcattatgccgttagtgctgccacccggtgagtgt
tggacgagatatgatgattatgacgatatgccgctctgtcttcagtttttcttcgaccgt
cttcaattggagaagctggaggctggggatgagatggctctgatcgacttgcatgctttc
gtgagtggtgtcgacttttttgcccagagggataatgacgcctttgctactgtcatgtca
acaactccacacctttcgaagatgatgtacgaatggcctcaaatgcagccatcgaagctt
gttagtgatgatgatacagaaccagagctaatagatgcacctcgttcatatgaaatcctg
gagaagcagctcacgctcaaggagctgggtattattaagctgacagcgatgtttgtggct
cggtatggctcagaatttcggcgggatttgatggaggtagtcttgatgaaccctctgttt
gagtttctgcagccaagtgattgcaagtgttcaaagttcttcagctcgcttgttagagtg
tattccactgttataatgccttccgacaagttgtggtacggtgacgattctacggctttc
gcccttgagtttttctcccgcactctccagctggagaagctcgaaaacggagatgagacg
gctgctattgatttgcatgcgcttgtgggtggagttgactgttttagtcacatgagtgaa
agcctctttcttgctttcgctccacaacctgaacacctttcgactatggtgaaacgacgg
ggatgtcagcttcttactgaattccataaggctgatgatgagaatctagatggaactgat
caacctgatggagtagctcggccttaccgtttcaaaagtagttttaagttccctgaaaag
gggatcacagtcagggagcttggtgttattatgctcacagcacagttcgtgcagcggtac
ggggagaagttccggctgggtttgaggaggagagttgttatgaacactcagtttgggttt
atggtctttggtgacaggaggcactatttctattgcggccttctttgtgcgtatagaagt
gtattaaggccctgcaaaaggatgaagaggagcgctgcgtatacagataccgttcttgac
atgtttttcgagattctccaatcgcaggagggggagagaattggtttgcatgattttgtg
ggtcttgttgactggtttgctcacgtggaggaggaatattattctgttgtggtgccagca
cctgtacacgttttgatgaatatgatcccaccaacactcaggctgcctaatacgcttttg
ctgcctccaatgaaaccttcagttactcatgatcctgctcaaagaagacatgaccatctt
gcatctcctgctgggcggtccacactccgggaagagtatattattaaggtgacggcgcag
tttgtggtgcggtatgggacgagttttgagcgagctttgaggaggagagtggctgagaca
cctaagtttgagtttatgaagccgactggtagaaagttccgtttgtatgcaagttgtgtt
gaggggtttgcacaagtattagagccttgcaaaaaacgtgttgattgtatggacacagtt
cttgagggtttgttctgttttctggatcgtgagcatgaggaggcagtgggcatcgggttg
catggttttgtggatgttgtggattgttttgcttccatggatcatgtggtgccacaatgc
ctcattccaccgggatgccaagttcatcttcgtgctcatggtcagccttcaaggaggggg
atgaagcgacctgcaccatttgaggaaccagagccaaataggaagagagccaaaaagaca
aacagactagagtcaggtcttggtccagaagaagaccattctcatgctaaacatccgggt
tggtctacttcaatcacggtatttgttccaaacgtcggtgaagtgaaagtagctgggtga

DBGET integrated database retrieval system