Raphanus sativus (radish): 108839494
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Entry
108839494 CDS
T06014
Name
(RefSeq) diaminopimelate epimerase, chloroplastic-like
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00300
Lysine biosynthesis
rsz00470
D-Amino acid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01230
Biosynthesis of amino acids
Module
rsz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
108839494
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
108839494
Enzymes [BR:
rsz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
108839494
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
VARLMGL
Motif
Other DBs
NCBI-GeneID:
108839494
NCBI-ProteinID:
XP_056860321
UniProt:
A0A9W3D8Y6
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Position
2:33790680..33792743
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AA seq
217 aa
AA seq
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MSTLITSVNLDNDPRVLGILLLSGKRSSLRAILFHTYSDYCNSPSAKKPNLVARLMGLDL
RPDDLDLSRSSKNSVRGHRVSDNGSEIDARLSLQLDREREQAVKLCDQNFGVGADGVIFV
MHGINGADYTMRIFNSDGSEPEMCGNGVRCFAKFIAEIENLQGKHRYIVIRDNGQVKVDM
GEPILRAEDVPTRLQGNKGESIVAALDGVCSALYTCN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccttgataacaagtgtcaaccttgataacgacccacgagtgctgggcatttta
ctgctgagcgggaaaagatcaagtcttagagctattcttttccacacatactctgattac
tgcaactcacctagcgctaagaaaccaaacttggtggctagactcatgggtcttgatctt
cgtcctgatgacttagaccttagtagatcctcaaagaatagtgtaagaggacatagagtc
tctgataacggctcggagattgatgcccgcctctctcttcagctagacagagagagagag
caggctgtgaagctctgtgatcaaaacttcggcgttggtgctgacggagtcatctttgtg
atgcatgggattaatggcgctgattacactatgaggatattcaactcagatggtagtgaa
cctgagatgtgtggcaatggagttagatgctttgcaaagttcattgctgagattgagaat
ctacagggaaagcataggtatattgtaatcagagataatgggcaagttaaggttgatatg
ggggaaccgatcctaagagcagaggatgtgcctacgaggttgcaagggaacaaaggtgag
tctattgttgcggcactggatggtgtttgttctgctctgtacacttgcaattga
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