Raphanus sativus (radish): 108839497
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Entry
108839497 CDS
T06014
Name
(RefSeq) ABC transporter B family member 2 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108839497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108839497
04147 Exosome [BR:
rsz04147
]
108839497
04090 CD molecules [BR:
rsz04090
]
108839497
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108839497
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108839497
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108839497
CD molecules [BR:
rsz04090
]
Proteins
108839497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_22
RsgA_GTPase
AAA_21
AAA_15
AAA_30
AAA_7
DUF87
AAA_19
DUF815
nSTAND1
DUF2714
Motif
Other DBs
NCBI-GeneID:
108839497
NCBI-ProteinID:
XP_056859203
UniProt:
A0A9W3D713
LinkDB
All DBs
Position
2:34018864..34025307
Genome browser
AA seq
1234 aa
AA seq
DB search
MEASSDPATTKEKQKATPKVSLLKLFSFADFYDCVLMTLGSIGACIHGASVPVFFIFFGK
LINIIGLAYLYPHLASHKVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKMRRAYL
RSMLSQDISLFDTEASTGEVISAITSDILVVQDALSEKVGNFLHYISRFIAGFAIGFSSV
WQISLVTLSIVPLIALAGGIYAFVAIGLIARVRKSYIKAGEIAEEVIGNVRTVQAFTGEE
RAVKLYREALQNTFKYGRKAGLTKGLGLGSLHCVLFLSWALLVWFTSVVVHKDIADGGKS
FTTMLNVVIAGLSLGQAAPDISAFVRAKAAAYPIFKMIERDTAAKTSAKTGRRLSKVDGH
IQFKNVTFSYPSRPDVLIFDKLNLSIAAGKIVALVGGSGSGKSTVISLIERFYEPNSGAV
WLDGNDIKDLDIKWLRGQIGLVNQEPALFATTIRENIMYGKDDATNEELARAAKLSEAIS
FINNLPEGFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQE
ALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLISNPDGAYSALLRLQE
TASLQRNPSLIRTLSRQQSMKYSGDLSRTRTSFCSDRDSVTRQDGAEPSKKTKVTVGRLY
SMIRPDWMYGLCGTICAFIAGSQMPLFALGVSHSLVSYYEKDWVDTQKEVKKVAILFCCA
SAITLIVYTIEHICFGTMGERLTLRVREKMFSAILKNEIGWFDEVDNTSSMLASRLESDA
TLLKTIVVDRSTILLQNLGLVVTSFVISFMLNWRLTLVVVATYPLVISGHISEKLFMQGY
GGNLSKAYLKANMLAGESVSNIRTVAAFCAEDKILELYSRELLEPSKRSFRRGQTAGLLY
GISQFFIFSSYGLALWYGSTLMDKGLSNFKSVMKTFMVLIVTALAMGETLALAPDLLKGN
QMVASVFEILDRKTRIVGETSEELSNVEGTIELKGVHFSYPSRPDVVIFKDFDLVVRSGK
SMALVGQSGSGKSSVISLILRFYDPTAGKVMIEGKDIKKLDLKALRKHIGLVQQEPALFA
TTIYENILYGNEGATQSEVIEAATLANAHSFITSLPQGYSTKVGERGVQMSGGQRQRIAI
ARAILRNPEILLLDEATSALDIESERVVQQALDRLMTNRTTVVVAHRLSTIQNADTISVL
HGGKIVEQGSHHRLVLNKTGPYFKLISLQQQQHP
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtccagtgatccggcgaccacgaaggagaagcagaaggcgacaccgaaggtg
tcacttcttaagctcttctcctttgctgatttctacgattgcgttctgatgactctagga
tcaatcggcgcgtgcattcacggagcctccgttccggtctttttcatattctttggcaaa
ctcatcaacattattggtctagcttatctctatccacaccttgcctctcacaaagtagcc
aagtactcgttggattttgtatatctgagtgtggctatactattctcttcatggttagag
gttgcatgttggatgcatacgggagagaggcaggcggcaaaaatgaggagagcttatcta
cggtcaatgttaagtcaagacataagcttatttgataccgaagcttcaactggagaagtc
atatcagccatcacctccgacattctcgtcgtccaagacgccctctcagagaaggtaggg
aatttcttgcactatataagccggttcatagccggttttgcaatcggattctcgagcgta
tggcaaataagtcttgtcactctatccatagtccctctcattgctctagctggcggcatc
tacgcgttcgtggccatcggacttatcgcccgagtccgaaaatcatacatcaaggccggt
gaaattgcggaagaggtgatcggtaatgtgaggaccgtgcaagcattcacgggtgaagaa
agggcggtgaaactataccgagaagctctccagaacacgttcaagtacgggagaaaagct
ggtttaaccaaaggactaggtcttggttccttacactgtgtcttgtttctatcatgggct
ttgctcgtctggttcacaagcgttgtggtccacaaggatatcgcagatggtggcaaatca
ttcactacaatgctcaatgttgtcattgctggcctgtctcttggacaagcagcgccggat
atttccgcgtttgtacgtgccaaagctgctgcatatccaatttttaagatgattgaacgt
gacacggcggctaaaacgagcgcaaaaactggccgtagactcagcaaagtagacggacac
atacaattcaagaacgtgacttttagctacccatctcgcccagatgtattaatcttcgac
aagctaaacctatccatcgctgccgggaaaatcgtggcactcgttggaggaagcgggtca
gggaagagcacggtcatatccttgatagagcggttctacgagccaaactctggagccgtg
tggctagacggaaacgatattaaagatcttgatataaagtggttaaggggacagattggt
ttggttaatcaagaaccagctctgtttgctacaacgattcgtgagaacattatgtacggt
aaagatgacgcgacgaatgaggagcttgcccgtgctgcaaagctctcggaagctatttcg
tttatcaacaacctccctgaagggtttgagacccaggttggagagaggggaattcaactt
tccggtggacagaaacagaggattgcgatatcaagagcaatcgtgaagaatccatcgata
cttttactcgacgaggcgacaagtgctctagatgcagagtcagagaagagtgttcaagaa
gcgttggatagagtgatggttggaagaacaaccgtggttgtggctcacagactctcaacg
gtaagaaatgcagacatcatagcggttgttcatgaagggaagattgtagagtttggaaac
cacgagaacctcatatctaatccggacggggcctactctgctctccttcgtctccaagaa
actgcctcattgcagcgtaacccttccttgattcgcacgctaagcaggcaacagagtatg
aagtattcaggggatctatcaagaacaagaacgagcttctgctcagatagggactcagta
actcgacaggacggcgcagagccatccaaaaagactaaagtgacagttggacgtctttat
tctatgatccgaccggactggatgtacggactttgtggcacaatatgtgcctttattgct
ggatctcagatgcctcttttcgcccttggagtctcacactccttagtttcatactacgag
aaggattgggtggacacccaaaaagaagtcaagaaggtcgccatcctcttctgctgcgct
tcagccatcactctcattgtctacaccatcgagcatatctgctttggtactatgggcgag
cgtctcactctccgtgtccgtgaaaagatgttctcagcgatcttgaagaatgaaatcggg
tggtttgatgaggtggacaacacgagctcgatgttggcgtcgcggctagagagtgacgcc
actttgcttaaaaccatagtggtcgataggtcaaccattctacttcagaacttaggtctc
gttgtgacatctttcgtcatttccttcatgctcaactggcgtcttactcttgtcgtagtg
gccacatacccattggttataagtggccatataagcgagaaacttttcatgcaaggctat
ggagggaacttgagcaaagcgtacttaaaggccaacatgttggccggagagtctgttagc
aacatccgaaccgtcgctgccttctgtgccgaggataagatcttagaactgtattcaaga
gagctattagaaccctccaaacgttctttcagacgtggacaaacagctggtcttttgtac
ggcatctctcagttcttcattttctcctcctatggactcgctctctggtacgggtcaacg
ttgatggataaaggactatcgaatttcaaatcggtgatgaaaacgttcatggttttgatc
gtgacggctttagcgatgggtgagacattggctctagctccggatctgctgaaaggaaac
cagatggtcgcgtctgtgttcgaaatcttggaccggaagactcggattgttggagaaaca
agcgaggagctgagtaatgtggaaggcacgattgagctcaaaggcgtccactttagctac
ccttcaagaccggatgttgtgatttttaaggactttgatctggtagttcgttccggaaag
agcatggcgctcgtcggacagagtggctccgggaaaagttcggtcatttcactcattctc
cggttctatgacccgaccgcaggaaaagtcatgatagagggaaaagacattaagaaacta
gacttgaaagcactgaggaaacacattggtctggttcaacaagaaccagcacttttcgcg
accacaatatacgagaacattttgtacggaaacgaaggagctactcaatctgaagtcatc
gaagcagctactctcgcaaacgctcacagcttcatcacctctctgccacaaggctactct
accaaagtaggtgaacgcggcgttcagatgtcaggcggtcagagacagaggatcgctatc
gctagagccatcctcaggaatcctgagattctgctccttgacgaagccacaagcgctttg
gacattgaatccgaacgtgtggtacaacaagcactggatcggttaatgacaaaccggaca
acggtggtggttgctcaccggttatcgacgatccagaacgcggacacgataagtgtgcta
catggaggcaagatcgtagagcaaggcagccaccataggctcgttctgaacaagacgggt
ccttattttaaactcatcagccttcagcagcaacaacatccttaa
DBGET
integrated database retrieval system
