Raphanus sativus (radish): 108839517
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Entry
108839517 CDS
T06014
Name
(RefSeq) phospholipase D beta 1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00564
Glycerophospholipid metabolism
rsz00565
Ether lipid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108839517
00565 Ether lipid metabolism
108839517
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108839517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108839517
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108839517
Membrane trafficking [BR:
rsz04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108839517
Endosome - Golgi transport
Others
Others
108839517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
108839517
NCBI-ProteinID:
XP_056858932
UniProt:
A0A9W3D528
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All DBs
Position
1:902028..907642
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AA seq
1071 aa
AA seq
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MENYGSRYPYPYPQYPYPAYPYPPAAPYRPPPGSEQYPPPPPPPYYPYPPPPPPTYANPP
PPPYATPPPPLHQHASGSHSGPLDYPPQSSSSSSPEYHRHSFDYQPSPYPSPYPAHPQAT
YAPPPPPHYPYQEPPQYPPSETKPQDPPPPSKTQAYPEYRRQDCLTSVPQDNVSSSASSY
PPVDELLGDLRLSDKPHLSSYPSNSWQPRPPELYGYPNSSFPSNSHLPILDRVDSSSSPY
PSSESPHAVDMRMTLFGKGSLKVLLLHGNFDIWIYHAKNLPNMDMFHKTLGDVFGGQLNR
KITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQL
IGLVTIPVEQIYSGAKIEGTFPILSSNGKPCKPGANLSLSIQYTPMERLSVYHHGVGAGP
DYQGVPGTYFPLRKGGTVTLYQDAHVPEGMLPGIRLDNGMSYQHGKCWHDMFDAIRQARR
LIYITGWSVWHKVRLVRDKVGPASACTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKT
DGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREVGTIYTHHQKNVIVDADAGG
NRRKIVAFVGGLDLCDGRYDTPQHPLFRTLQTIHKDDFHNPTFTGNLSGCPREPWHDLHS
KIDGPAAYDVLTNFEERWLKAAKPSGIKKFKTSYDDALLRIDRIPDIVGVSDTPTISEND
PEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIY
IENQYFIGSSYNWNAHKDIGANNLIPMEIALKIAEKIRANERFAAYIVIPMWPEGVPTGA
ATQRILYWQHKTMQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREMVDGIDNSGTGS
PSNANTPQALSRKSRRFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQP
QHTWARKQSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIECVRKVRTMGERNWEQFAAE
EVSDMRGHLLKYPVEVDRKGKVRPLPGSEAFPDVGGNIVGSFIAIQENLTI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggagaattatggatcacgttatccgtacccttacccgcagtacccatacccggcttac
ccatatccaccagcagctccttacagaccacctcccggttcagagcaataccctcctcca
cctccaccaccttattacccttatcctcctcctcctccgcctacttacgcaaacccacca
ccaccaccatatgctacgcctcctcctccacttcatcagcacgcttcaggctctcattct
ggcccattggactaccctccacaatcctcctcctcctcatctcctgagtatcaccgccat
tctttcgactaccaaccttctccttacccttctccttatcctgctcatccccaggccacc
tatgctcctcctcctcctcctcactatccctatcaagagcctccccaataccctccttct
gaaactaaaccccaagatcctccccctccctctaaaactcaagcctatccagaatatcgt
aggcaagactgtctcacctctgtgcctcaagacaatgtaagcagttctgcttcctcttat
cctcccgttgatgaacttcttggtgaccttcgcctttctgacaagccacatttgtcttcc
tacccttccaactcctggcaaccccgtcctcctgaattgtatggttaccctaacagctcc
ttccctagcaactctcatctccctatcttagaccgtgttgattcctcttcttctccctat
ccttcttctgaatcccctcatgccgtcgacatgcgtatgaccctctttggtaaaggttcc
ttgaaggtccttttgctccatggtaattttgacatctggatctatcatgccaaaaacctc
cctaacatggacatgttccataagactctcggtgacgttttcggaggccagctcaaccgc
aaaattaccagtgatccttacgtttctgtttctgtcgctggtgctgttattggaagaact
tatgttatgagcaacagtgaaaaccctgtctggatgcagcatttttatgttcccgttgct
catcatgctgctgaagttcattttgttgttaaagacagcgatgttgttggttctcagctt
ataggtttggttacaattcctgtcgaacagatctactctggcgccaaaattgaaggcact
tttcctattctaagcagtaacggcaagccttgtaaacctggtgctaatttatcactatcc
atccagtatactcctatggagagacttagtgtttatcatcatggtgttggagcaggtcct
gactaccagggcgtccctggaacttattttccgcttagaaaaggcggaactgtgaccttg
taccaagatgcgcatgtccctgaaggtatgctccctggtatcagactagacaatggtatg
tcttaccaacatggcaagtgttggcatgatatgtttgatgccatacgccaggccaggcgt
ttgatttatatcactggttggtcagtctggcacaaagttaggctggttcgggataaagtg
ggtcccgcctcagcatgtactcttggtgagctcttaagatcaaagtcccaagaaggtgtt
agagtcctgcttttagtttgggatgatccaacttcacgtagcatcttgggttataaaaca
gatggtgttatggccacccatgatgaggagacacgccgtttcttcaagcactcctcagtt
caagtcctgctctgcccccgtaatgctggaaagcgacatagttgggtcaagcagagggaa
gttgggacaatctatacacaccaccaaaaaaacgtaatagtggatgcagatgctggtggt
aacagaaggaaaattgtagctttcgtcggtgggcttgatctgtgtgatggccgatatgac
actcctcaacatccattgtttaggacactacaaacaattcataaagatgattttcacaac
cccaccttcacgggaaacctttctggatgtccaagagagccatggcatgacttgcacagt
aagattgatggcccggctgcgtatgatgtgctaaccaacttcgaggagaggtggttgaag
gctgcgaagcctagcgggatcaagaagtttaagacttcctatgatgatgcgttgttgagg
atcgataggattccagatatagtgggagtttctgatacccctactattagcgagaacgat
cctgaggcttggcatgttcagattttccgttcaatcgactcaaactctgtaaaaggtttc
ccgaaggatccaaaagatgctacatgcaagaacttggtgtgtgggaagaacgtactcatt
gatatgagcatacacacagcgtatgtcaaggccattcgtgcagcccaacacttcatatat
atagagaatcagtatttcatcgggtcttcctacaactggaatgcgcacaaggacataggt
gctaataatttgattcctatggaaattgcgttgaagatagctgaaaagatcagggcaaat
gaacgctttgctgcatatattgtcattccaatgtggccagaaggtgttccaactggtgct
gctacccaaaggattctgtactggcagcacaagacaatgcagatgatgtatgagactatc
tacaaggcgttagtggagaccggacttgagggagcattctccccacaagattacctcaat
ttcttctgtcttggcaacagagaaatggtggatggaatcgataactcgggaacaggaagt
ccaagcaacgcaaacactcctcaggcattgagtcggaaaagcagaagatttatgatctat
gttcactcgaaagggatggtcgtagatgatgaatacgtagtaattggatcggcaaatata
aaccaacgatcaatggaaggcacaagagatacagagattgcaatgggagcatatcagcca
cagcatacatgggcaaggaaacaatctggtccaaggggtcagatatatggatacagaatg
tcgctgtgggcagagcatatggcaacgttagatgactgcttcacgcaaccggagagtata
gaatgtgtaaggaaagtgagaacaatgggggagaggaactgggaacagtttgcagctgaa
gaagtctcagacatgagaggacatctgttaaagtatccagtggaagtggatcggaaaggc
aaagttcgaccactacctgggagtgaggcgttcccggacgtgggagggaacattgtcgga
tcgttcatagccatccaggagaatctaaccatttga
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