Raphanus sativus (radish): 108839583
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Entry
108839583 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108839583
KO
K14791
periodic tryptophan protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108839583
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108839583
Pre-60S particles
Other pre-60S particles
108839583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
DUF1999
Motif
Other DBs
NCBI-GeneID:
108839583
NCBI-ProteinID:
XP_056849636
UniProt:
A0A9W3CDW3
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All DBs
Position
2:38042170..38045037
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AA seq
476 aa
AA seq
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MDSTKDMLRMVSSVSWIPKGAAKVMLDAAEPPSKEKIQELINNGTLKKSTLSDMYEEEEM
DDVEVAQAKAVAKSFAKSCTISNGASTSTSSTDPEVVKFMKELDMDNYDDDEDDEIDLFS
SGRGDLYYPSNDMDPYLNNNTDDDYYDSDDVEAITLKPTDSLIICARVEDGINYLEVYNY
EGPQNMYLREDIILSNPPLCTAWLDCPLKGGDKGNFVAIGFKGSPTIEIWDLDVAKEVLP
CVQLGAGQISDCDIDQSVIDLAWNKEFRNIIASASADKKVKVWDVATGQCKLTLEHHTEV
VQAVEWNHYAPQVLLSGSYDCTVVLKDGRDPSHSGLKWSTNAKVESLAWYPHSEHSFVVS
LEDGTVKGFDIRASDLSPSFTIHAHDDEVSSISYNTFSPNLLATGSMDKSVKLWDLSNNQ
PSWVATHNPNAGGVFSVSFSADSPFLLAIGAEKGKLNVWDTLSDSAVSRRYGSNRP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatagtacgaaagatatgcttagaatggtaagttcagtttcatggatacctaaagga
gcagcaaaagtcatgcttgacgctgctgaacctccttctaaggagaagatccaagagctc
atcaacaatggcactctcaagaaaagtactctgagtgatatgtatgaagaagaagagatg
gatgatgttgaagttgctcaagccaaggctgtagcaaaatcttttgcaaaatcatgcacc
ataagcaacggtgcttctacctctacttcttcaactgatcctgaggtagtcaagttcatg
aaagaactcgacatggataactatgatgatgatgaggatgatgagattgatctgtttagc
tctggccgcggagacctttattacccaagcaatgacatggatccctatctgaacaataat
actgacgatgattactacgactcagacgatgtcgaggctataacacttaagccaacagat
tcactgatcatctgcgctagagttgaagatggaatcaactacctcgaggtttacaattac
gagggacctcaaaatatgtatcttcgtgaagacataatactatccaaccctccattgtgt
acagcatggcttgattgtcctctcaaaggaggggataaagggaactttgtagctatcggg
ttcaagggatcaccgacgattgagatatgggatcttgacgttgctaaggaggtgctacct
tgtgtacaactaggtgccgggcagatatcagattgcgacattgatcaatcagtaattgat
ctagcttggaacaaggagtttaggaatataattgctagtgccagtgccgacaaaaaagtt
aaggtttgggatgtggctacaggacagtgcaagctcactctagagcatcacacagaagtg
gttcaagcggtcgaatggaaccactatgctccacaagtcctcctcagtggctcatatgac
tgcactgtagtcttgaaagatggaagggacccttctcactcgggtttgaaatggtctact
aatgccaaagtagaaagcttggcctggtatcctcatagcgaacactcctttgtggtgagt
cttgaagatggaactgtgaagggatttgatatacgtgcttctgatttatcacctagtttc
actatccatgctcatgatgacgaagtctcctccatctcatacaacacattttcgcccaat
cttttggctacaggatctatggataaaagtgtgaaactttgggatctttcaaacaatcaa
ccatcatgggttgctacacataatccaaacgctggaggagttttctcagtctcattctct
gcggactcccccttcttactcgctatcggtgccgaaaaaggaaagctaaacgtgtgggat
acactatctgacagtgctgtgtcccggagatatggaagcaaccgaccatga
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