Raphanus sativus (radish): 108839624
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Entry
108839624 CDS
T06014
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108839624
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108839624
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
108839624
NCBI-ProteinID:
XP_018467882
UniProt:
A0A6J0M697
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Position
2:28345588..28348297
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AA seq
687 aa
AA seq
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MLTPLFVSARAIPSRITISSLNPNQNPSNAAKAPNFDQFKENPEAAIKVSTTAPWMKGPL
FLPPEELIDTSHHHHNKKSTRKQEKTFKALNRRESGVRGSKAMKKIVRSVEKLDEGSSDY
GGEFKSLEEAESTRRRMPWEREVDKFILRRRKKERVSSTADLILEEGLLKRLRLEGSKLR
KWVNVRKAGVTEAVVKEIRSIWEGNELAMVRFDVPLSRNMERAQEILELKTGGLVVLSKK
EFLVVYRGPLTTSSSSVWVKKGQDDEISSSLYEREGERLLNGLGPRYMDWWMRRPFPVDA
DLLPQVVDGYKTPSRRCPPNTRAKLSDKELTYLRNIAQALPFHFVLGRNYGLQGLASAIV
KLWEKCVIAKIAIKWGALNTNNEEMADELKHLTGGVLILRNKYLIILFRGKNFLSDEVAD
LVEDRERLLRRYQHFEETKRESDIEISEVVTNGEQLEETSKTGTLLEFQELQRKFGEMKM
RNLETEAEKAKLDKELKSQEHKLSILRSKIEKTTTELLKLNSLWKPSEGDDDVEILTNEE
RECLRRIGLKMNSSLVLGRRGVFDGVMEGLHQHWKHREVAKVITMQKIFSGVVYTAKSLE
AESNGVLISIEKLKEGHAILMYRGRNYRRPSSKLMAQNLLTKRKALQRSVVMQRLGSLKF
FAYQRERAIEDLKLSLVKLQDSASELC
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctaactcctctcttcgtctcggcgcgagctataccatcacgaatcaccatctcctcc
ttaaaccctaaccaaaacccttcaaatgccgccaaagctccaaactttgatcaattcaag
gagaaccccgaagctgcgattaaggtctcgacaaccgctccatggatgaaaggtcctctc
tttcttccacccgaagagcttatcgacacttcacatcatcaccacaacaagaagagcacc
aggaaacaggagaagacgttcaaggcactgaaccgtagagagagcggtgtgagaggaagt
aaagccatgaagaagatcgtccgtagcgttgagaagctcgacgaaggcagcagcgattac
ggaggtgagtttaagtccttggaggaggctgagagcacgaggaggagaatgccttgggag
agggaggtagataagttcatattgaggaggaggaagaaggagagagtctcttcaacggct
gatcttatcttagaggaagggttgttgaaaaggctgagacttgaaggttcgaagctgaga
aaatgggtgaatgttagaaaagcaggagttacagaagcagttgttaaggaaattagatcg
atatgggaaggaaacgagcttgctatggtgaggtttgatgtccctctttctcgaaacatg
gaacgagctcaagagatcttagagttgaagactggagggttggttgtgttaagcaagaag
gagtttctcgttgtttatcgaggaccactaacgacgagtagcagctctgtatgggtgaag
aagggacaagatgatgagattagctcatcgttgtacgagagagaaggtgagaggttattg
aatggattaggacctagatatatggattggtggatgagaagaccgtttcctgtcgatgct
gacttacttcctcaagtagttgacggatataaaactccatctagacgttgcccacctaac
actagagctaagcttagcgacaaagagcttacttacttgagaaacattgctcaggctcta
ccgtttcatttcgtccttgggaggaactatgggcttcaaggtttagcttctgctattgtg
aaactatgggagaagtgtgtcattgcaaagattgcaatcaaatggggagctctcaataca
aacaatgaggaaatggcagatgaattgaagcatctcactggaggagttctgatactacga
aataagtacttgataatactgttcagaggcaagaactttctatctgatgaagttgcggac
ttggttgaggacagagagaggttactcaggagataccaacattttgaagagaccaaacga
gagagcgatatagagatctcagaggtggtaacaaatggtgaacagttggaggaaacgagc
aagaccggaacattattagagtttcaagaacttcagagaaagtttggtgaaatgaagatg
agaaacctggagactgaagctgagaaagcaaagctggataaggaactcaaaagccaagaa
cacaagctttccattctgagatcaaagatagagaagacaacaacagagttgctcaaattg
aattctttatggaaaccatccgagggcgacgatgatgtcgagatactgactaatgaagaa
agagaatgcttgaggagaatcggactgaagatgaacagcagcttggttcttggaagaaga
ggagtctttgatggtgtaatggaaggtctgcatcagcattggaagcacagggaggttgct
aaagtgatcactatgcagaagattttctcgggagttgtttacacagcgaaatcacttgaa
gcagagagcaatggagtactgatctcaattgaaaaactcaaagaagggcatgcgatactc
atgtaccgtggcaggaactacagacgtccttcgtcaaaattgatggcgcagaatcttttg
acaaaaaggaaagctttacaaagatctgttgtgatgcagagactcggctcactgaagttc
tttgcttaccagagagaaagagccattgaagatttgaagttgagtttggtaaaacttcaa
gactctgcttctgagctatgctga
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