KEGG   Raphanus sativus (radish): 108839672
Entry
108839672         CDS       T06014                                 
Name
(RefSeq) protein NBR1 homolog
  KO
K17987  next to BRCA1 gene 1 protein
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108839672
   03029 Mitochondrial biogenesis [BR:rsz03029]
    108839672
Membrane trafficking [BR:rsz04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    108839672
  Pexophagy
   Other pexophagy associated proteins
    108839672
  Aggrephagy
   Cargo receptors
    108839672
  Xenophagy
    108839672
  Other autophagy associated proteins
   Midbophagy
    108839672
Mitochondrial biogenesis [BR:rsz03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    108839672
SSDB
Motif
Pfam: N_BRCA1_IG UBA_NBR1_C PB1 ZZ
Other DBs
NCBI-GeneID: 108839672
NCBI-ProteinID: XP_018467939
UniProt: A0A6J0M7C4
LinkDB
Position
2:33513288..33516672
AA seq 706 aa
MDSTTALVVKVSYGGVLRRFRVPFKANGQLDLDMASLRGKIAALFNLSLDAADFSLTYSD
EDGDVVALVDDNDLFDVTNQRLKFLKINVQSNAGMSANSVAPESSGSSSASAMADIQNPV
SKIQKGFNDVMMSVPNPMRDTISKVYIDLTSKAASSSPVVGELFDCINKLGKLSSPQESS
PCSPVTRPGSSGPSLSREVPSAGEKKDVSKKTQAGKKPANLNEPVADSTSSGLGASFNEC
PFSGSRVIDSSPNPTNFNKHARRVCHSKKTSNGDYWASLGVFHKGIRCDGCGVLPITGPR
FKSKVKEDYDLCTICFSVMGNEGDYTRMDKPVSAQHLHPFRGLPTPFSNPWLGHVPRPNH
GGLHFRCTRPKLDSRFVLDVNVLDGTVVAPSAPFTKIWKMRNNGSLVWPHGTQIVWIGGD
RFSSSLSVDLQIPVEGVPINSELDVKVEFVAPESPGRYISYWRMASSNGAKFGQRVWVLI
HVDASLKGSVVNEFHGLNLNAYPEENFAREFSGINVNHVPAQSGSPSVNPGTVKGADLEP
EASSGSNNLIKDDLVVGEVEPAVPNTLTPSSSSSSSSSSFNIIEFPNMTTTVEALGGGSS
STKNIPVPLQEDIEKNDVEITMLKELEEMGFKEIDLNKEILRDNEYNLEQSVDALCGVSE
WDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGEKEKEA
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggattctactactgcactcgtcgttaaggtgagttatggaggtgtgcttaggcgcttc
agggttcctttcaaagcaaatggacagcttgatcttgacatggcttctcttaggggaaag
atcgctgctttgtttaacctctctctggatgctgctgacttttctctgacttactctgat
gaagatggtgatgtggtggcccttgttgatgacaatgacctctttgatgtcaccaatcag
cgcctcaagttcctgaagattaatgtgcagtccaacgctggtatgtctgctaactctgtt
gctccagagagcagtgggagttcatcagcctcggctatggcggatatccagaacccggtt
tctaagatccagaagggtttcaatgatgttatgatgtctgtgcctaaccccatgcgtgat
accatatcgaaggtgtatattgaccttacatctaaagcggcatcttctagccctgtggtt
ggtgagctgtttgactgcatcaacaagctaggaaagctctcaagccctcaggaaagtagt
ccttgctctcctgttactaggcctggctcgtcaggtccttctttgagcagggaggttcct
tccgctggtgaaaagaaggatgtatctaagaagacccaagctggaaaaaaacctgctaat
ttgaatgaacctgttgctgattcaacctcctctggactgggtgctagtttcaacgagtgt
cccttcagtggcagtcgcgtgattgattccagtccgaatccaacgaatttcaacaagcat
gcccgtcgtgtatgtcactccaagaagaccagcaatggtgattactgggcctcactgggt
gtcttccataagggcatccgttgtgatggatgtggagttcttccaattactgggcctaga
ttcaagtctaaagtcaaagaagactatgatctttgcaccatatgtttttcggtgatgggt
aatgaaggggattacacaagaatggataagcctgtctcagctcaacatctacatcccttt
agaggactacctaccccattttcaaacccttggttgggacatgtgccgcgaccaaaccat
ggaggtttacatttcaggtgtactcggcctaaactagacagtcgctttgtccttgatgtc
aatgtacttgatggaacagttgttgctccatctgctccattcaccaagatctggaaaatg
aggaacaatggttcgctggtgtggccgcatggcacgcaaatcgtttggatcggtggggac
agattcagcagctctttgtcagttgatttacagattccagtcgagggtgtgcctatcaac
agtgagcttgacgttaaagttgaatttgttgcaccagagtcacctggtcgatacatttct
tattggaggatggcttcctctaatggtgctaagttcgggcaacgtgtttgggtgttgata
catgttgatgcatctttgaagggctctgttgtgaacgagtttcatggacttaacttgaat
gcctaccctgaggaaaattttgcaagagagttttcagggatcaatgtgaatcatgttcca
gctcagtctggcagccccagtgttaaccctgggacagtgaaaggtgctgatcttgaacca
gaagcttcttcgggatcaaacaatctgataaaagatgacctggtggttggtgaagttgag
cctgctgttcctaacactcttactccatcttcatcttcatcttcatcttcttcatcattc
aacataatcgagttcccaaatatgactactactgttgaggccttgggtggtggttcctca
tctacaaagaacatcccagttcctcttcaagaggatattgagaagaacgacgtggagata
accatgctcaaggagctcgaggagatgggtttcaaagagattgatctgaacaaggaaatc
ctgagggataatgagtacaacttggagcagtctgttgatgctctttgtggagttagcgag
tgggatcctatcttagaggagcttcaggaaatgggcttctgtgatgatgtgacgaacaag
aggctactgaagaagaacaatggaagcatcaaaggcgtggtgatggatctcctcactggt
gagaaggagaaggaggcttag

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