Raphanus sativus (radish): 108839672
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Entry
108839672 CDS
T06014
Name
(RefSeq) protein NBR1 homolog
KO
K17987
next to BRCA1 gene 1 protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108839672
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108839672
Membrane trafficking [BR:
rsz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108839672
Pexophagy
Other pexophagy associated proteins
108839672
Aggrephagy
Cargo receptors
108839672
Xenophagy
108839672
Other autophagy associated proteins
Midbophagy
108839672
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108839672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
UBA_NBR1_C
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
108839672
NCBI-ProteinID:
XP_018467939
UniProt:
A0A6J0M7C4
LinkDB
All DBs
Position
2:33513288..33516672
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AA seq
706 aa
AA seq
DB search
MDSTTALVVKVSYGGVLRRFRVPFKANGQLDLDMASLRGKIAALFNLSLDAADFSLTYSD
EDGDVVALVDDNDLFDVTNQRLKFLKINVQSNAGMSANSVAPESSGSSSASAMADIQNPV
SKIQKGFNDVMMSVPNPMRDTISKVYIDLTSKAASSSPVVGELFDCINKLGKLSSPQESS
PCSPVTRPGSSGPSLSREVPSAGEKKDVSKKTQAGKKPANLNEPVADSTSSGLGASFNEC
PFSGSRVIDSSPNPTNFNKHARRVCHSKKTSNGDYWASLGVFHKGIRCDGCGVLPITGPR
FKSKVKEDYDLCTICFSVMGNEGDYTRMDKPVSAQHLHPFRGLPTPFSNPWLGHVPRPNH
GGLHFRCTRPKLDSRFVLDVNVLDGTVVAPSAPFTKIWKMRNNGSLVWPHGTQIVWIGGD
RFSSSLSVDLQIPVEGVPINSELDVKVEFVAPESPGRYISYWRMASSNGAKFGQRVWVLI
HVDASLKGSVVNEFHGLNLNAYPEENFAREFSGINVNHVPAQSGSPSVNPGTVKGADLEP
EASSGSNNLIKDDLVVGEVEPAVPNTLTPSSSSSSSSSSFNIIEFPNMTTTVEALGGGSS
STKNIPVPLQEDIEKNDVEITMLKELEEMGFKEIDLNKEILRDNEYNLEQSVDALCGVSE
WDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGEKEKEA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggattctactactgcactcgtcgttaaggtgagttatggaggtgtgcttaggcgcttc
agggttcctttcaaagcaaatggacagcttgatcttgacatggcttctcttaggggaaag
atcgctgctttgtttaacctctctctggatgctgctgacttttctctgacttactctgat
gaagatggtgatgtggtggcccttgttgatgacaatgacctctttgatgtcaccaatcag
cgcctcaagttcctgaagattaatgtgcagtccaacgctggtatgtctgctaactctgtt
gctccagagagcagtgggagttcatcagcctcggctatggcggatatccagaacccggtt
tctaagatccagaagggtttcaatgatgttatgatgtctgtgcctaaccccatgcgtgat
accatatcgaaggtgtatattgaccttacatctaaagcggcatcttctagccctgtggtt
ggtgagctgtttgactgcatcaacaagctaggaaagctctcaagccctcaggaaagtagt
ccttgctctcctgttactaggcctggctcgtcaggtccttctttgagcagggaggttcct
tccgctggtgaaaagaaggatgtatctaagaagacccaagctggaaaaaaacctgctaat
ttgaatgaacctgttgctgattcaacctcctctggactgggtgctagtttcaacgagtgt
cccttcagtggcagtcgcgtgattgattccagtccgaatccaacgaatttcaacaagcat
gcccgtcgtgtatgtcactccaagaagaccagcaatggtgattactgggcctcactgggt
gtcttccataagggcatccgttgtgatggatgtggagttcttccaattactgggcctaga
ttcaagtctaaagtcaaagaagactatgatctttgcaccatatgtttttcggtgatgggt
aatgaaggggattacacaagaatggataagcctgtctcagctcaacatctacatcccttt
agaggactacctaccccattttcaaacccttggttgggacatgtgccgcgaccaaaccat
ggaggtttacatttcaggtgtactcggcctaaactagacagtcgctttgtccttgatgtc
aatgtacttgatggaacagttgttgctccatctgctccattcaccaagatctggaaaatg
aggaacaatggttcgctggtgtggccgcatggcacgcaaatcgtttggatcggtggggac
agattcagcagctctttgtcagttgatttacagattccagtcgagggtgtgcctatcaac
agtgagcttgacgttaaagttgaatttgttgcaccagagtcacctggtcgatacatttct
tattggaggatggcttcctctaatggtgctaagttcgggcaacgtgtttgggtgttgata
catgttgatgcatctttgaagggctctgttgtgaacgagtttcatggacttaacttgaat
gcctaccctgaggaaaattttgcaagagagttttcagggatcaatgtgaatcatgttcca
gctcagtctggcagccccagtgttaaccctgggacagtgaaaggtgctgatcttgaacca
gaagcttcttcgggatcaaacaatctgataaaagatgacctggtggttggtgaagttgag
cctgctgttcctaacactcttactccatcttcatcttcatcttcatcttcttcatcattc
aacataatcgagttcccaaatatgactactactgttgaggccttgggtggtggttcctca
tctacaaagaacatcccagttcctcttcaagaggatattgagaagaacgacgtggagata
accatgctcaaggagctcgaggagatgggtttcaaagagattgatctgaacaaggaaatc
ctgagggataatgagtacaacttggagcagtctgttgatgctctttgtggagttagcgag
tgggatcctatcttagaggagcttcaggaaatgggcttctgtgatgatgtgacgaacaag
aggctactgaagaagaacaatggaagcatcaaaggcgtggtgatggatctcctcactggt
gagaaggagaaggaggcttag
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integrated database retrieval system