Raphanus sativus (radish): 108839813
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Entry
108839813 CDS
T06014
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04142
Lysosome biogenesis
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108839813
04142 Lysosome biogenesis
108839813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108839813
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
108839813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_N
DUF6759
Motif
Other DBs
NCBI-GeneID:
108839813
NCBI-ProteinID:
XP_018468091
UniProt:
A0A6J0M931
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All DBs
Position
2:23843313..23845749
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AA seq
302 aa
AA seq
DB search
MNYLRGAFKPACNISITFTDGKNRKQVPVKKDNGQMVMNPLFQSQETIAGKVCIEPYQGK
KVEHNGVKVELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYEKKTYPFEFSTVEMPYETY
NGVNVRLRYVLKVTVTRGYAGSIVEYQDFVVRNYSPLPPINNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVILGKVYFLLVRIKIKNMDLEIRRRESTGAGANTHVETETLAKFELMDGAP
VRGESIPVRLFLTPYDLTPTHKNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKEE
TS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcttcgtggagctttcaagccggcatgtaacatttcaatcacattcactgat
gggaagaatcgtaaacaggttccggttaagaaagataatggacaaatggttatgaaccca
ctttttcagagtcaagaaactattgctggcaaggtttgtattgaaccgtatcaagggaag
aaagtggagcacaatggtgttaaagttgagcttcttggtcaaatagaaatgtactttgac
agaggaaacttctatgactttacttccctagttcgggagcttgatgtacctggagaaata
tatgaaaagaagacatacccttttgaattttcgaccgttgagatgccatatgagacatac
aatggcgtgaatgtacggctaaggtatgtcctgaaagtaacagttacacgtggttatgct
ggaagcatcgtggagtatcaggactttgtggtgcgcaactattctccactacctccaatc
aacaacagcatcaagatggaagttggaatcgaggactgcctgcatatcgagtttgagtac
aataaaagcaagtatcacctgaaagatgttatcctcgggaaagtatactttcttctggtg
agaatcaagataaagaatatggatcttgagatcagacggagagaatcaaccggagcagga
gctaatactcacgtcgagacagaaacattggccaaatttgagttgatggatggtgctccc
gttagaggcgaatcgatacctgtaagactgttcttgacaccatacgatctgacgccaacg
cataagaacataaacaacaaattcagtgttaagtattatctgaatcttgtcctggttgac
gaagaggatcgccgttacttcaagcaacaagaaatcacgttgtacaggctcaaggaggag
acttcttga
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