Raphanus sativus (radish): 108839838
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Entry
108839838 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108839838
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108839838
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
108839838
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108839838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
DUF2621
FtsJ
Motif
Other DBs
NCBI-GeneID:
108839838
NCBI-ProteinID:
XP_018468113
UniProt:
A0A6J0M813
LinkDB
All DBs
Position
2:complement(38636713..38640785)
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AA seq
749 aa
AA seq
DB search
MARGRRKRGSSHRNQSEESRENVPKPLKYEASIDSSIQNRIWSNLEFEEYYKEQRIVKAE
EWYSFIEILRKPLPAAFRVNSNGQFCHEILSILENDFVKSLQAEAVESGEVEAIKPLPWY
PNNLAWHSNFSRKEIRKNQTLERFHEFLKLETEVGNMTRQEAVSMVPPLFLDVHPDHFVL
DMCAAPGSKTFQLLEIIHESAEPGSLPNGMVVANDVDYKRSNLLIHQTKRTCTTNLIVTN
NEGQHFPICNSKRALSIESDKYHAPIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGS
GNGLHSLQVVIAMRGLSLLKVDGRMVYSTCSMNPIEDEAVVAEILRRCGCSVELVDVSDK
LPELIRRPGLKKWKVHDRGGWYRSYKDVPKLQRDSVLRSMFPSGKSDKDSTTGGGSSSGE
MASDESAEEVCDLPLERCMRIVPHDQNTGGFFIAVLHKVSPLPDFPEKLNQRRSTRGRNS
SDKSSYEEVSDTVITQPEENTEEIVVEAAVLDNGLKLEKESTSEEGTVESTQEVPPPVQK
GKWKGLDPVVFLRDETVISGIKRFYGINDESFPLNGHLVTRNSDTSSKGNVKRIYYVSRS
VKDVLELNLAVGQKIKVASVGLKMFEKQSARECEAGTCSFRITSEGLSVILPYMTKQILY
ATMVDFKNLLQYKSIKFPNFVQPQFGEKAAEVAEGYCVVILVDGTEKDGCEAVKVNSSTI
AIGCWKGKASLTVMVTTVDCDQLLQKLAC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaggaagacgaaaaagaggaagttcccataggaatcaatcagaagagagcaga
gaaaacgttccaaaacccctcaaatacgaagcttccatcgattctagcatccaaaatcgc
atctggtcgaatcttgagttcgaggagtattacaaggagcaaaggatagtgaaagcagag
gagtggtattcattcattgagattcttcgtaagccgttgcctgctgctttcagagttaac
tccaatggccagttttgccatgagattctgtccatattggagaatgacttcgtgaaatct
cttcaggctgaggctgtagagagtggtgaagtggaggctatcaagcccttgccttggtac
cctaacaatcttgcttggcattctaatttttctcgcaaggagattcgaaaaaaccagacc
cttgaaaggtttcatgagtttttaaagttggaaactgaagttgggaacatgaccaggcaa
gaagctgttagcatggtacctcctctcttccttgatgtgcatccagatcattttgtcctc
gacatgtgtgctgcacctggttccaagacatttcagctacttgaaataatacatgagtca
gctgaaccaggatctctacctaatggaatggtggtggcgaacgatgttgattataaaagg
tctaaccttcttattcaccaaactaagagaacctgtacgaccaacttgatagtcaccaac
aatgaaggtcaacatttcccaatctgcaactcgaagagagcattgtccatagaatctgac
aagtaccatgctcccattgaccagctgctctttgatcgtgtcttatgcgatgtaccctgt
agtggtgatggtactctgcgcaaggctccagacatatggcgaagatggaattctggatca
ggaaatggacttcatagcctacaagttgtgattgccatgagaggtttgtccctgctgaaa
gttgatgggagaatggtatactcaacctgctcaatgaacccaattgaagatgaagctgtt
gttgctgaaattctgaggagatgtggatgctctgttgagcttgtagatgtctcagataag
cttcctgaacttatccgaagaccaggtcttaagaaatggaaggtgcatgatagaggtggc
tggtatagatcttacaaagatgttccaaaactgcagagagacagcgttctaagaagcatg
tttccttctggtaaaagtgacaaagactcaacaacaggtggcggaagcagctctggagaa
atggcttctgatgaatcagccgaggaagtctgtgatcttccccttgaacgctgtatgagg
atagtgcctcatgatcagaacactgggggatttttcattgcagtgcttcacaaagtttca
cctttaccagattttccggagaaactaaatcagagaaggtctaccagaggcagaaactca
tctgataaatcttcgtatgaagaagtctctgacactgtgattactcaaccagaagagaat
acagaggaaatagttgtagaagcagcagtgttagataatggcttgaagcttgagaaggaa
agcaccagcgaagaaggcactgtggaatcgactcaagaagtaccaccaccagtgcaaaaa
gggaagtggaaaggccttgaccctgttgttttcttgagagatgaaacagtgatcagcggg
atcaagaggttttacggcatcaatgatgagtcttttcctctcaatggccatctcgtgact
agaaacagcgacacgagcagcaaaggcaacgtgaagaggatttactatgtttcaagatcg
gttaaggatgttcttgagcttaaccttgcggttgggcagaagattaaggtcgcatctgtt
ggcctcaagatgtttgagaaacaatcggcaagagaatgtgaagctggcacttgctcattc
cggataacatcagagggattgtctgtgatccttccctacatgaccaagcagatactttat
gcaacaatggtggatttcaagaatctcctgcaatacaaatcgatcaagttcccgaatttt
gtccagccacagtttggcgagaaagcagcagaagtagcagagggatattgcgttgttatt
cttgttgatggtactgagaaggacgggtgtgaagcagtcaaagtgaattcatcaacaata
gccattggatgctggaagggcaaagcgagcttaactgttatggtaacgacagtggactgt
gaccaacttcttcagaaacttgcttgctga
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