Raphanus sativus (radish): 108839918
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Entry
108839918 CDS
T06014
Name
(RefSeq) probable vacuolar amino acid transporter YPQ1
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108839918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108839918
Transporters [BR:
rsz02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
108839918
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Ortholog
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GFIT
Motif
Pfam:
PQ-loop
Motif
Other DBs
NCBI-GeneID:
108839918
NCBI-ProteinID:
XP_018468199
UniProt:
A0A6J0M836
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Position
2:complement(37727316..37729741)
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AA seq
391 aa
AA seq
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MVYAGYCLKEKKTCVRWVERYFDDCLCNLNDEVSFSLGIVSLICWGVAEIPQIITNFRTK
SSHGVSLSFLLAWVAGDIFNLIGCLLEPATLPTQFYTALLYTVSTVVLVIQTVYYDYIYR
LCTHGRTKICQKEEEDEEKRPLNPPKTMGSAISIPGESYKASPLREFYYTSARSLAGSGT
PPLRTSYFRVAKSGPSAMTIDSGSSSDEDEDETMLTLPVVTAKTITQPRPIPRQTGFGTF
LAASVSLPLQVKSLAEKYAHASSRRLLNERRVEHSALGQWLGWLMAAIYMGGRIPQIWLN
IKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWDSIKANLPWLLDAIVCVLLDLFIIL
QYIYYKYCSSKGEEEEHGYGDYVEASKTLVS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatgcaggttactgcttgaaggagaagaagacatgtgtgagatgggtggagaga
tacttcgatgactgtctttgtaacctgaacgatgaagtctcgttctcacttggaatcgtt
agccttatctgctggggcgtggcagagattccccagatcattaccaacttccgtacaaaa
tctagtcatggtgtctctctatctttcctcctcgcttgggtcgctggtgatatcttcaat
ctcatcgggtgtcttcttgaaccagctaccttgccgactcagttctacacagccttgctt
tacacagtgagcaccgtggtattagtgatccagacagtttactacgactatatctacaga
ctttgtacacatggacgcaccaagatctgtcaaaaggaggaagaggatgaagagaagagg
ccattaaacccaccgaagacgatgggatctgcaatttccatcccaggagaatcttacaaa
gcttctcctctgagagagttctattacacgtcagcgagatcactggccggaagcggaaca
ccgcctttaagaacgtcgtattttcgggtggctaagagtggaccttcagccatgacaata
gatagtggttcctcctcggacgaagacgaagacgagacaatgttgacgcttcctgttgta
acggctaagaccattacccaaccaaggccaatcccaagacagacaggttttggaacgttc
ttagccgcatctgttagccttccgctgcaggtcaaaagcctagcggaaaagtatgcacat
gcttcaagcaggcggcttctaaatgaaagaagagttgagcatagcgcattgggacaatgg
ttgggatggctaatggcagccatttacatgggtggtcgcatccctcagatctggctaaac
atcaaacgaggaagcgtggagggattgaatccactcatgtttatatttgcgcttgtagcc
aatgcaacatacgttggtagtattcttgtaagaacaactgaatgggatagtatcaaagca
aatctcccttggttgcttgatgctattgtctgcgtcctactcgatctatttatcatattg
cagtatatctactacaagtattgcagctcaaaaggcgaagaagaagaacatggctacgga
gactatgtggaagcaagcaaaactttggtttcgtga
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