KEGG   Raphanus sativus (radish): 108840035
Entry
108840035         CDS       T06014                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03018  RNA degradation
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108840035
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108840035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108840035
   03041 Spliceosome [BR:rsz03041]
    108840035
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108840035
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108840035
Spliceosome [BR:rsz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108840035
SSDB
Motif
Pfam: LSM M11L
Other DBs
NCBI-GeneID: 108840035
NCBI-ProteinID: XP_018468348
UniProt: A0A6J0M7J7
LinkDB
Position
2:8294783..8296728
AA seq 98 aa
MAATTGLESLVDQIISVITNDGRNIVGVLRGFDQATNIILDESHERVFSTKVGVQQLVLG
LYIIRGDNIGVIGELDEELDASLDLSKLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcagcaactactggactcgagtctcttgtcgatcagatcatttcggttattacaaac
gatggacgcaacattgtgggagttctcagaggttttgaccaggcgactaatataattctg
gatgaatctcatgaacgcgtcttttccacaaaggtaggagtacaacaacttgtcttgggt
ttgtacattatcagaggcgacaacataggtgttataggggagctggacgaggagctcgat
gctagtctggacttatcgaaactgagagctcatcctttgaaacccgtcgtgcattga

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