KEGG   Raphanus sativus (radish): 108840064
Entry
108840064         CDS       T06014                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
  KO
K12897  transformer-2 protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108840064
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108840064
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108840064
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108840064
Spliceosome [BR:rsz03041]
 Common components
  Common spliceosomal components
   SR proteins
    108840064
SSDB
Motif
Pfam: RRM_1 RRM_DEAH11 RRM_5
Other DBs
NCBI-GeneID: 108840064
NCBI-ProteinID: XP_056859692
UniProt: A0A9W3D777
LinkDB
Position
2:38161784..38163918
AA seq 232 aa
MATESPLKERDSRSPSPRKQRSISRSRSRSMPRSRSRSRSLPRHISPSRTRGRSEVENPG
TTLYVTGLSTRVTDKDLESHFSKEGKVSSCFLVIEPRTRESRGFAFVTMDTLKDADRCIK
YLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDDERDGRSSRGRHYDRDDYRHRR
SPRRDYSPRGGGGRRSPRREYSPRGGGRSSRRDRSYSPYGRRSPERRSERRY
NT seq 699 nt   +upstreamnt  +downstreamnt
atggcaacagagtctcctctaaaagaaagagattctcgatctccttcaccacgaaaacaa
cggtccatttctaggtccagatccagatccatgccgaggtctaggtctaggtctagatct
ttgccaaggcatatatctccatcaagaacccgtggaaggtctgaagttgaaaaccctggt
accactctctatgtgactggcctatccacaagagtcaccgacaaggatcttgaatcacat
ttctccaaggaaggcaaggtatcttcttgctttctagtaatagagccgcgcacccgcgag
tctcgtggttttgcctttgttacaatggatacccttaaggacgctgaccggtgcatcaag
tatctcaaccagtctgtacttgaaggccgttacatcactgtcgaaaggtcccgaagaaag
cgccccagaactcccaccccaggccactatcttggcttgaaaagctccagagacgatgag
cgggatggccgtagcagtcgagggaggcactatgatcgtgatgattataggcaccgtagg
tcaccaagacgtgactattcaccccgtggtggtggtggaaggaggtcaccaagacgtgag
tattcacctcgtggtggtggaagaagttctagaagagatcgatcttactctccgtatgga
agaagaagcccagagagaaggtctgagagaaggtattaa

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